RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 MIF4GDA9UHW6 222 aaKnown RBP11.34□□□□□ -0.59
ERCC8-208ENST00000497892 UPK3BL1B0FP48 263 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 UPK3BL2E5RIL1 263 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 TRAFD1O14545 582 aaPredicted RBP11.34□□□□□ -0.59
ERCC8-208ENST00000497892 NRDCO43847 1150 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 SOCS5O75159 536 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 PCDH8O95206 1070 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 SYPP08247 313 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 CCNB1P14635 433 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 TIMP2P16035 220 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 PECAM1P16284 738 aaPredicted RBP11.34□□□□□ -0.59
ERCC8-208ENST00000497892 JUNDP17535 347 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 SDHBP21912 280 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 PTPN7P35236 360 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 SMCPP49901 116 aaPredicted RBP11.34□□□□□ -0.59
ERCC8-208ENST00000497892 RWDD2BP57060 319 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 MAXP61244 160 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 RPS21P63220 83 aaKnown RBP11.34□□□□□ -0.59
ERCC8-208ENST00000497892 IFI35P80217 286 aaPredicted RBP11.34□□□□□ -0.59
ERCC8-208ENST00000497892 BCL2L1Q07817 233 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 GRIK2Q13002 908 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 TEAD4Q15561 434 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 UGP2Q16851 508 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 ZNF284Q2VY69 593 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 LRRC73Q5JTD7 316 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 CFAP58Q5T655 872 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 STPG1Q5TH74 334 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 KAZNQ674X7 775 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 SEL1L3Q68CR1 1132 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 BBS12Q6ZW61 710 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 TTC7BQ86TV6 843 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 PRPF39Q86UA1 669 aaKnown RBP11.34□□□□□ -0.59
ERCC8-208ENST00000497892 CCNYQ8ND76 341 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 SNIP1Q8TAD8 396 aaKnown RBP11.34□□□□□ -0.59
ERCC8-208ENST00000497892 LRRN4Q8WUT4 740 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 SERAC1Q96JX3 654 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 MRGPRX2Q96LB1 330 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 ZDHHC5Q9C0B5 715 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 BRD8Q9H0E9 1235 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 NOD2Q9HC29 1040 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 NT5MQ9NPB1 228 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 HAUS2Q9NVX0 235 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 GGT7Q9UJ14 662 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 CDV3Q9UKY7 258 aaKnown RBP11.34□□□□□ -0.59
ERCC8-208ENST00000497892 ZFR2Q9UPR6 939 aaKnown RBP11.34□□□□□ -0.59
ERCC8-208ENST00000497892 EFR3BQ9Y2G0 817 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 PRAMEF26H0Y7S4 382 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 APOC4-APOC2K7ER74 178 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 KCNK1O00180 336 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 NEMP1O14524 444 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 CDX4O14627 284 aaPredicted RBP11.33□□□□□ -0.6
ERCC8-208ENST00000497892 SLC30A4O14863 429 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 WNT9AO14904 365 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 VILLO15195 856 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 HTRA2O43464 458 aaPredicted RBP11.33□□□□□ -0.6
ERCC8-208ENST00000497892 FTCDO95954 541 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 APOC2P02655 101 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 HLA-DQB2P05538 268 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 PRLRP16471 622 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 MMP12P39900 470 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 CSNK1EP49674 416 aaKnown RBP11.33□□□□□ -0.6
ERCC8-208ENST00000497892 BNC1Q01954 994 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 ELP6Q0PNE2 266 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 AP1B1Q10567 949 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 ZBTB17Q13105 803 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 PRKD1Q15139 912 aaPredicted RBP11.33□□□□□ -0.6
ERCC8-208ENST00000497892 LLGL1Q15334 1064 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 RSPO4Q2I0M5 234 aaPredicted RBP11.33□□□□□ -0.6
ERCC8-208ENST00000497892 LAYNQ6UX15 382 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 BZW1Q7L1Q6 419 aaKnown RBP11.33□□□□□ -0.6
ERCC8-208ENST00000497892 RETREG3Q86VR2 466 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 UBL4BQ8N7F7 174 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 TMEM145Q8NBT3 493 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 P3H4Q92791 437 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 RMDN1Q96DB5 314 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 HES6Q96HZ4 224 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 PDLIM2Q96JY6 352 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 IL12RB2Q99665 862 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 SEMA3CQ99985 751 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 HERPUD2Q9BSE4 406 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 OSBPL8Q9BZF1 889 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 PCDH12Q9NPG4 1184 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 AASDHPPTQ9NRN7 309 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 RBM22Q9NW64 420 aaKnown RBP eCLIP11.33□□□□□ -0.6
ERCC8-208ENST00000497892 DLL3Q9NYJ7 618 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 SAE1Q9UBE0 346 aaPredicted RBP11.33□□□□□ -0.6
ERCC8-208ENST00000497892 AMFRQ9UKV5 643 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 GUCA1BQ9UMX6 200 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 ATP8A1Q9Y2Q0 1164 aa11.33□□□□□ -0.6
ERCC8-208ENST00000497892 ASCC3Q8N3C0 2202 aaKnown RBP11.32□□□□□ -0.6
ERCC8-208ENST00000497892 A0A1B0GVT2 93 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 A0A1W2PQ67 120 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 A0A1W2PR77 199 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 C4orf47A7E2U8 309 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 SLC31A1O15431 190 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 DDX3YO15523 660 aaKnown RBP11.32□□□□□ -0.6
ERCC8-208ENST00000497892 WNT1P04628 370 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 PYGMP11217 842 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 ITIH2P19823 946 aa11.32□□□□□ -0.6
ERCC8-208ENST00000497892 HNRNPA2B1P22626 353 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms