RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 TNFSF13BQ9Y275 285 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 MRPS17Q9Y2R5 130 aaKnown RBP4.52□□□□□ -1.69
VPS52-222ENST00000495981 TMEM98Q9Y2Y6 226 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 VWA7Q9Y334 891 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 ITPR2Q14571 2701 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 ABCA7Q8IZY2 2146 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 ANAPC1Q9H1A4 1944 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 UTP20O75691 2785 aaKnown RBP4.52□□□□□ -1.69
VPS52-222ENST00000495981 OR14I1A6ND48 311 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 SLC38A8A6NNN8 435 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 B4E171 279 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 M0QZQ0 153 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 PRRG1O14668 218 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 PPEF2O14830 753 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 MTSS1O43312 755 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 ASNA1O43681 348 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 SLC43A1O75387 559 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 OR4Q2P0C623 313 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 MCF2P10911 925 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 ATP1A3P13637 1013 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 CD59P13987 128 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 JUPP14923 745 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 GJA1P17302 382 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 ATF6P18850 670 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 BCKDHBP21953 392 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 MUTP22033 750 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 LRPAP1P30533 357 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 GDI1P31150 447 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 TSPAN7P41732 249 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 ETV4P43268 484 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 SLC11A2P49281 568 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 TOB1P50616 345 aaPredicted RBP4.51□□□□□ -1.69
VPS52-222ENST00000495981 SEC24CP53992 1094 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 PEX3P56589 373 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 NOMO3P69849 1222 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 CFHR1Q03591 330 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 NCBP1Q09161 790 aaKnown RBP4.51□□□□□ -1.69
VPS52-222ENST00000495981 TWF1Q12792 350 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 PLCL1Q15111 1095 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 ANKRD1Q15327 319 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 TOMM20Q15388 145 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 TEAD2Q15562 447 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 IL17AQ16552 155 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 PRR31Q5SQ13 230 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 L1TD1Q5T7N2 865 aaKnown RBP4.51□□□□□ -1.69
VPS52-222ENST00000495981 TPGS2Q68CL5 300 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 ZNF280DQ6N043 979 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 ZDHHC24Q6UX98 284 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 FRMD1Q8N878 549 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 LINC00482Q8N8I6 264 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 PLA2G15Q8NCC3 412 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 TMEM161BQ8NDZ6 487 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 OR10T2Q8NGX3 314 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 MSANTD3Q96H12 275 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 SERINC2Q96SA4 455 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 FAM167BQ9BTA0 163 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 ANP32EQ9BTT0 268 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 CNPPD1Q9BV87 410 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 CCDC94Q9BW85 323 aaPredicted RBP4.51□□□□□ -1.69
VPS52-222ENST00000495981 ENKD1Q9H0I2 346 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 FOXP1Q9H334 677 aaPredicted RBP4.51□□□□□ -1.69
VPS52-222ENST00000495981 CYP4F11Q9HBI6 524 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 FBRSL1Q9HCM7 1045 aaKnown RBP4.51□□□□□ -1.69
VPS52-222ENST00000495981 POLD4Q9HCU8 107 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 SLAMF7Q9NQ25 335 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 TMEM74BQ9NUR3 256 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 SLC38A7Q9NVC3 462 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 AGAP1Q9UPQ3 857 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 GOLGA4Q13439 2230 aaKnown RBP4.51□□□□□ -1.69
VPS52-222ENST00000495981 NBASA2RRP1 2371 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 AKAP9Q99996 3911 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 PCDH15Q96QU1 1955 aa4.51□□□□□ -1.69
VPS52-222ENST00000495981 MTORP42345 2549 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 KNTC1P50748 2209 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 ATG2BQ96BY7 2078 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 RALGAPA1Q6GYQ0 2036 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 TTC26A0AVF1 554 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 MYBPHLA2RUH7 354 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 MTMR11A4FU01 709 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 TRABD2BA6NFA1 517 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 A6NLC8 198 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 HEPACAM2A8MVW5 462 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 SPECC1L-ADORA2AF8WAN1 911 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 HRKO00198 91 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 SLC16A4O15374 487 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 HOXC11O43248 304 aaPredicted RBP4.5□□□□□ -1.69
VPS52-222ENST00000495981 TRAPPC3O43617 180 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 TLX3O43711 291 aaPredicted RBP4.5□□□□□ -1.69
VPS52-222ENST00000495981 TOM1L1O75674 476 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 SOAT2O75908 522 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 UNC5CO95185 931 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 OAZ2O95190 189 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 PIGRP01833 764 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 ADRB2P07550 413 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 CCDC192P0DO97 292 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 PSMC3P17980 439 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 PTPN7P35236 360 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 CCT6AP40227 531 aaKnown RBP4.5□□□□□ -1.69
VPS52-222ENST00000495981 EIF2S3P41091 472 aaKnown RBP4.5□□□□□ -1.69
VPS52-222ENST00000495981 TNFSF9P41273 254 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms