RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 GLOD4Q9HC38 313 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 PCDH9Q9HC56 1237 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 AASDHPPTQ9NRN7 309 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 RSPH14Q9UHP6 348 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 SLC6A14Q9UN76 642 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 ITM2BQ9Y287 266 aa12.17□□□□□ -0.46
CSNK1E-213ENST00000495232 TCRBV7S2A1N4TA0A589 114 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 IGLON5A6NGN9 336 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 PRAMEF26H0Y7S4 382 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 AREL1O15033 823 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 SLC31A1O15431 190 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 LATO43561 262 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 TM7SF2O76062 418 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 PRKCGP05129 697 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 SYPP08247 313 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 CYP2A6P11509 494 aaPredicted RBP12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 AKT2P31751 481 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 ATXN3P54252 364 aaPredicted RBP12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 RACK1P63244 317 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 NIPAL4Q0D2K0 466 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 WASHC5Q12768 1159 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 ARHGEF7Q14155 803 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 PRPSAP1Q14558 356 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 PCSK7Q16549 785 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 ZNF284Q2VY69 593 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 AASDHQ4L235 1098 aaPredicted RBP12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 SEL1L3Q68CR1 1132 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 SLC23A3Q6PIS1 610 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 PRR23CQ6ZRP0 262 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 ZNF567Q8N184 647 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 LRRC45Q96CN5 670 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 RMDN1Q96DB5 314 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 TRIM44Q96DX7 344 aaPredicted RBP12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 IMP4Q96G21 291 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 NSMCE3Q96MG7 304 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 NAP1L3Q99457 506 aaPredicted RBP12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 SMOC1Q9H4F8 434 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 C10orf88Q9H8K7 445 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 TM9SF3Q9HD45 589 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 GGT7Q9UJ14 662 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 ZFR2Q9UPR6 939 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 ZNF148Q9UQR1 794 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 CHKBQ9Y259 395 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 ZKSCAN5Q9Y2L8 839 aa12.16□□□□□ -0.46
CSNK1E-213ENST00000495232 CFAP69A5D8W1 941 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 GOLGA6CA6NDK9 693 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 GOLGA6BA6NDN3 693 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 A8MX80 341 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 PATE3B3GLJ2 98 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 LZTS3O60299 673 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 MAGEC1O60732 1142 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 MMP20O60882 483 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 PAK4O96013 591 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 ATP1A1P05023 1023 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 ELFN1P0C7U0 828 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 GOLGA6DP0CG33 693 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 PRLRP16471 622 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 ITIH2P19823 946 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 NFKB1P19838 968 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 HNRNPA2B1P22626 353 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 CD38P28907 300 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 ACTN2P35609 894 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 MMP12P39900 470 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 LIG3P49916 1009 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 C21orf59P57076 290 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 RPL26P61254 145 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 SKOR1P84550 965 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 SF3A2Q15428 464 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 TMEM52BQ4KMG9 183 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 TMEM259Q4ZIN3 620 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 ANKRD20A2Q5SQ80 823 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 ANKRD20A1Q5TYW2 823 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 ANKRD20A3Q5VUR7 823 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 NAPEPLDQ6IQ20 393 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 ARHGEF18Q6ZSZ5 1173 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 KDELC2Q7Z4H8 507 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 ZSWIM9Q86XI8 627 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 KIAA2013Q8IYS2 634 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 LPCAT1Q8NF37 534 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 SLC6A18Q96N87 628 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 PPP1R2P1Q96PQ5 205 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 TDRD1Q9BXT4 1180 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 PARD6AQ9NPB6 346 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 HOMER3Q9NSC5 361 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 GOLGA6AQ9NYA3 693 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 FAM153AQ9UHL3 310 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 DNPEPQ9ULA0 475 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 RPL26L1Q9UNX3 145 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 R3HDM2Q9Y2K5 976 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 GON4LQ3T8J9 2241 aa12.15□□□□□ -0.46
CSNK1E-213ENST00000495232 TRPM6Q9BX84 2022 aa12.15□□□□□ -0.47
CSNK1E-213ENST00000495232 F5H423 210 aaPredicted RBP12.14□□□□□ -0.47
CSNK1E-213ENST00000495232 FPGTO14772 594 aa12.14□□□□□ -0.47
CSNK1E-213ENST00000495232 LIASO43766 372 aa12.14□□□□□ -0.47
CSNK1E-213ENST00000495232 FZD6O60353 706 aa12.14□□□□□ -0.47
CSNK1E-213ENST00000495232 OPHN1O60890 802 aa12.14□□□□□ -0.47
CSNK1E-213ENST00000495232 PMPCBO75439 489 aa12.14□□□□□ -0.47
CSNK1E-213ENST00000495232 ANXA9O76027 345 aa12.14□□□□□ -0.47
CSNK1E-213ENST00000495232 MT-CYBP00156 380 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms