RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 LRRC73Q5JTD7 316 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 SYCP2LQ5T4T6 812 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 FBXL19Q6PCT2 694 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 RGL4Q8IZJ4 473 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 TEX26Q8N6G2 289 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 NUDCD1Q96RS6 583 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 TUBGCP5Q96RT8 1024 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 SEMA3CQ99985 751 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 HDAC8Q9BY41 377 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 CPEB1Q9BZB8 566 aaKnown RBP11.7□□□□□ -0.54
CTSA-209ENST00000493522 C6orf106Q9H6K1 298 aaPredicted RBP11.7□□□□□ -0.54
CTSA-209ENST00000493522 DNAAF2Q9NVR5 837 aaKnown RBP11.7□□□□□ -0.54
CTSA-209ENST00000493522 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.69□□□□□ -0.54
CTSA-209ENST00000493522 TCRBV7S2A1N4TA0A589 114 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 C16orf96A6NNT2 1141 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 HACD1B0YJ81 288 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 MTSS1O43312 755 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 PLRG1O43660 514 aaKnown RBP11.69□□□□□ -0.54
CTSA-209ENST00000493522 FSBPO95073 299 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 RBP3P10745 1247 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 HOXB3P14651 431 aaPredicted RBP11.69□□□□□ -0.54
CTSA-209ENST00000493522 CR2P20023 1033 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 PTPN3P26045 913 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 ABL2P42684 1182 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 DSC2Q02487 901 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 NSUN2Q08J23 767 aaKnown RBP eCLIP11.69□□□□□ -0.54
CTSA-209ENST00000493522 KLF1Q13351 362 aaPredicted RBP11.69□□□□□ -0.54
CTSA-209ENST00000493522 XRCC4Q13426 336 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 RALGPS1Q5JS13 557 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 WDR45BQ5MNZ6 344 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 FAM182AQ5T1J6 154 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 KIAA0895LQ68EN5 471 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 NCEH1Q6PIU2 408 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 RAB44Q7Z6P3 723 aaPredicted RBP11.69□□□□□ -0.54
CTSA-209ENST00000493522 ADAT2Q7Z6V5 191 aaKnown RBP11.69□□□□□ -0.54
CTSA-209ENST00000493522 PROSER1Q86XN7 944 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 SLC13A5Q86YT5 568 aaPredicted RBP11.69□□□□□ -0.54
CTSA-209ENST00000493522 CAMK1DQ8IU85 385 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 SLC41A1Q8IVJ1 513 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 C17orf53Q8N3J3 647 aaPredicted RBP11.69□□□□□ -0.54
CTSA-209ENST00000493522 CHCHD4Q8N4Q1 142 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 TTC13Q8NBP0 860 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 OR2T34Q8NGX1 318 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 PDCD6IPQ8WUM4 868 aaKnown RBP11.69□□□□□ -0.54
CTSA-209ENST00000493522 FOXJ1Q92949 421 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 AGAP3Q96P47 875 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 IL12RB2Q99665 862 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 FERMT1Q9BQL6 677 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 SUV39H2Q9H5I1 410 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 NOD2Q9HC29 1040 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 KLHL8Q9P2G9 620 aaPredicted RBP11.69□□□□□ -0.54
CTSA-209ENST00000493522 AMACRQ9UHK6 382 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 JRKLQ9Y4A0 524 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 PCDHB9Q9Y5E1 797 aa11.69□□□□□ -0.54
CTSA-209ENST00000493522 PCDH15Q96QU1 1955 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 TBC1D3DA0A087WVF3 549 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 TBC1D3IA0A087WXS9 549 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 TBC1D3EA0A087X179 549 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 TBC1D3KA0A087X1G2 549 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 TSPAN11A1L157 253 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 TBC1D3FA6NER0 549 aaPredicted RBP11.68□□□□□ -0.54
CTSA-209ENST00000493522 TBC1D3LB9A6J9 549 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 NEMP1O14524 444 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 CEP104O60308 925 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 SOCS5O75159 536 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 PCDH8O95206 1070 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 CPP00450 1065 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 ATP1A1P05023 1023 aaKnown RBP11.68□□□□□ -0.54
CTSA-209ENST00000493522 TBC1D3HP0C7X1 549 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 CD59P13987 128 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 RBL1P28749 1068 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 CXCR5P32302 372 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 TAS2R38P59533 333 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 GNG11P61952 73 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 PPP2CBP62714 309 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 PPP2CAP67775 309 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 FAM193AP78312 1265 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 TRAF2Q12933 501 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 TRIP6Q15654 476 aaKnown RBP11.68□□□□□ -0.54
CTSA-209ENST00000493522 TBC1D3GQ6DHY5 549 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 ALG1LQ6GMV1 187 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 TBC1D3CQ6IPX1 549 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 DARS2Q6PI48 645 aaKnown RBP11.68□□□□□ -0.54
CTSA-209ENST00000493522 BRAT1Q6PJG6 821 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 TBC1D3Q8IZP1 549 aaPredicted RBP11.68□□□□□ -0.54
CTSA-209ENST00000493522 CADM4Q8NFZ8 388 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 OR2I1PQ8NGU4 316 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 HTR3CQ8WXA8 447 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 FAM131CQ96AQ9 280 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 VOPP1Q96AW1 172 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 ZNF641Q96N77 438 aaPredicted RBP11.68□□□□□ -0.54
CTSA-209ENST00000493522 ZDHHC5Q9C0B5 715 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 PCED1AQ9H1Q7 454 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 C10orf88Q9H8K7 445 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 PREBQ9HCU5 417 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 DKK3Q9UBP4 350 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 ITM2BQ9Y287 266 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 R3HDM2Q9Y2K5 976 aaKnown RBP11.68□□□□□ -0.54
CTSA-209ENST00000493522 ATP8A1Q9Y2Q0 1164 aa11.68□□□□□ -0.54
CTSA-209ENST00000493522 METTL12A8MUP2 240 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms