RNA–Protein interactions for RNA: ENST00000492932.5

PDCD4-210, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-210ENST00000492932 EDEM3Q9BZQ6 932 aa11.71□□□□□ -0.53
PDCD4-210ENST00000492932 SLC39A8Q9C0K1 460 aa11.71□□□□□ -0.53
PDCD4-210ENST00000492932 LRRC19Q9H756 370 aa11.71□□□□□ -0.53
PDCD4-210ENST00000492932 PCDH12Q9NPG4 1184 aa11.71□□□□□ -0.53
PDCD4-210ENST00000492932 GPATCH2LQ9NWQ4 482 aa11.71□□□□□ -0.53
PDCD4-210ENST00000492932 GULP1Q9UBP9 304 aa11.71□□□□□ -0.53
PDCD4-210ENST00000492932 KLQ9UEF7 1012 aa11.71□□□□□ -0.53
PDCD4-210ENST00000492932 SATB2Q9UPW6 733 aa11.71□□□□□ -0.53
PDCD4-210ENST00000492932 ATP8A1Q9Y2Q0 1164 aa11.71□□□□□ -0.53
PDCD4-210ENST00000492932 COQ6Q9Y2Z9 468 aa11.71□□□□□ -0.53
PDCD4-210ENST00000492932 U3KQA8 63 aa11.71□□□□□ -0.53
PDCD4-210ENST00000492932 FREM2Q5SZK8 3169 aa11.71□□□□□ -0.54
PDCD4-210ENST00000492932 MYLKQ15746 1914 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 DMXL2Q8TDJ6 3036 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 TSPAN11A1L157 253 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 CFAP69A5D8W1 941 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
PDCD4-210ENST00000492932 ELFN1P0C7U0 828 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 MYBL1P10243 752 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 ATP1A3P13637 1013 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 ERCC2P18074 760 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 ITIH2P19823 946 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 ARL4AP40617 200 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 SRP54P61011 504 aaKnown RBP11.7□□□□□ -0.54
PDCD4-210ENST00000492932 TPM4P67936 248 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 TLE3Q04726 772 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 IL10RBQ08334 325 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 KLHL30Q0D2K2 578 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 MTM1Q13496 603 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 INPP5AQ14642 412 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 NCAPHQ15003 741 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 ANO6Q4KMQ2 910 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 TMCO4Q5TGY1 634 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 PLEKHA7Q6IQ23 1121 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 IRF2BP2Q7Z5L9 587 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 CAMK1DQ8IU85 385 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 PSTKQ8IV42 348 aaKnown RBP11.7□□□□□ -0.54
PDCD4-210ENST00000492932 SLC35F3Q8IY50 421 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 WDR36Q8NI36 951 aaKnown RBP11.7□□□□□ -0.54
PDCD4-210ENST00000492932 FNIP1Q8TF40 1166 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 NSMCE1Q8WV22 266 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 SLC39A7Q92504 469 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 ZNF653Q96CK0 615 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 WDR92Q96MX6 357 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 SNRNP25Q9BV90 132 aaKnown RBP11.7□□□□□ -0.54
PDCD4-210ENST00000492932 TCEAL2Q9H3H9 227 aaPredicted RBP11.7□□□□□ -0.54
PDCD4-210ENST00000492932 HAUS4Q9H6D7 363 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 CAAP1Q9H8G2 361 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 PDFQ9HBH1 243 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
PDCD4-210ENST00000492932 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.7□□□□□ -0.54
PDCD4-210ENST00000492932 SIRPGQ9P1W8 387 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 MYO1AQ9UBC5 1043 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 CNOT8Q9UFF9 292 aaKnown RBP11.7□□□□□ -0.54
PDCD4-210ENST00000492932 GPR34Q9UPC5 381 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 RAI2Q9Y5P3 530 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 KNL1Q8NG31 2342 aa11.7□□□□□ -0.54
PDCD4-210ENST00000492932 CHD6Q8TD26 2715 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 ZZEF1O43149 2961 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.69□□□□□ -0.54
PDCD4-210ENST00000492932 A0A1W2PQ67 120 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 TMEM191CA6NGB0 347 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 H3BRJ5 948 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 TMX2-CTNND1H3BSU7 103 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 PDE2AO00408 941 aaPredicted RBP11.69□□□□□ -0.54
PDCD4-210ENST00000492932 ATXN7O15265 892 aaPredicted RBP11.69□□□□□ -0.54
PDCD4-210ENST00000492932 KLK10O43240 276 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 SERPINC1P01008 464 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 FTLP02792 175 aaPredicted RBP11.69□□□□□ -0.54
PDCD4-210ENST00000492932 GZMAP12544 262 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 MMP12P39900 470 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 SCNN1BP51168 640 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 AP1S1P61966 158 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 OGDHQ02218 1023 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 NSUN2Q08J23 767 aaKnown RBP eCLIP11.69□□□□□ -0.54
PDCD4-210ENST00000492932 ZNF235Q14590 738 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 LBRQ14739 615 aaKnown RBP11.69□□□□□ -0.54
PDCD4-210ENST00000492932 AGERQ15109 404 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 WSCD2Q2TBF2 565 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 TAF1BQ53T94 588 aaPredicted RBP11.69□□□□□ -0.54
PDCD4-210ENST00000492932 PERM1Q5SV97 790 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 TSEN2Q8NCE0 465 aaKnown RBP11.69□□□□□ -0.54
PDCD4-210ENST00000492932 PCDH19Q8TAB3 1148 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 TSACCQ96A04 125 aaPredicted RBP11.69□□□□□ -0.54
PDCD4-210ENST00000492932 ATXN7L3BQ96GX2 97 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 BBC3Q96PG8 261 aaPredicted RBP11.69□□□□□ -0.54
PDCD4-210ENST00000492932 GFM1Q96RP9 751 aaKnown RBP11.69□□□□□ -0.54
PDCD4-210ENST00000492932 BPIFA3Q9BQP9 254 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 STRADBQ9C0K7 418 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 CLPBQ9H078 707 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 WDR70Q9NW82 654 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 KCTD5Q9NXV2 234 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 TAS2R14Q9NYV8 317 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 SEPT3Q9UH03 358 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 MOSPD1Q9UJG1 213 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 OR1A2Q9Y585 309 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 PCDHGA8Q9Y5G5 932 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 ENTPD2Q9Y5L3 495 aa11.69□□□□□ -0.54
PDCD4-210ENST00000492932 CHD5Q8TDI0 1954 aa11.68□□□□□ -0.54
PDCD4-210ENST00000492932 PKD1L2Q7Z442 2459 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms