RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 PRPF4BQ13523 1007 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ITPK1Q13572 414 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 GRAPQ13588 217 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ACVR2BQ13705 512 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 FGL2Q14314 439 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 TNIP1Q15025 636 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 RASA2Q15283 850 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ZRSR2Q15696 482 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 UAP1Q16222 522 aaPredicted RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CNGA2Q16280 664 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 INAVAQ3KP66 663 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF260Q3ZCT1 412 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC38Q502W7 563 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ANKRD20A8PQ5CZ79 823 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 AARS2Q5JTZ9 985 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 DENND2CQ68D51 928 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 TLDC1Q6P9B6 456 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC137Q6PK04 289 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 PPP1R21Q6ZMI0 780 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 TRIM72Q6ZMU5 477 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 INTS8Q75QN2 995 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 PCGF5Q86SE9 256 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 DTX2Q86UW9 622 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM228AQ86W67 206 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 GPBP1Q86WP2 473 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 PPP1R3BQ86XI6 285 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF677Q86XU0 584 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC13A5Q86YT5 568 aaPredicted RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 TPH2Q8IWU9 490 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 NELFCDQ8IXH7 590 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC105Q8IYK2 499 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM186BQ8IYM0 893 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SYCP3Q8IZU3 236 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SIRT6Q8N6T7 355 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC89Q8N998 374 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 LMO3Q8TAP4 145 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CYP2W1Q8TAV3 490 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 TBC1D16Q8TBP0 767 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 GRAPLQ8TC17 118 aaPredicted RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF398Q8TD17 642 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 OSCP1Q8WVF1 389 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 DYDC1Q8WWB3 177 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CKAP2Q8WWK9 683 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CRYGNQ8WXF5 182 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 RFFLQ8WZ73 363 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ARHGEF2Q92974 986 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 RFKQ969G6 155 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF622Q969S3 477 aaKnown RBP eCLIP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC35C1Q96A29 364 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 KLHL29Q96CT2 875 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM167AQ96KS9 214 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SCLT1Q96NL6 688 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 RAB3IPQ96QF0 476 aaPredicted RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ACCSQ96QU6 501 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CAMKK2Q96RR4 588 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 DMRTA2Q96SC8 542 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 PSMB7Q99436 277 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 RIT2Q99578 217 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 EIF2AK1Q9BQI3 630 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SYT11Q9BT88 431 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 PTDSS2Q9BVG9 487 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 STRA6Q9BX79 667 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 RTFDC1Q9BY42 306 aaPredicted RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 PITPNM3Q9BZ71 974 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 MAF1Q9H063 256 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 DDX47Q9H0S4 455 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 DEFB129Q9H1M3 183 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 MMADHCQ9H3L0 296 aaPredicted RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ST6GALNAC4Q9H4F1 302 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 PLEKHA4Q9H4M7 779 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 C17orf75Q9HAS0 396 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ATP6V0A4Q9HBG4 840 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 NOD2Q9HC29 1040 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 GPR35Q9HC97 309 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 KCNK9Q9NPC2 374 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SIX2Q9NPC8 291 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 UBE2TQ9NPD8 197 aaPredicted RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 UBN1Q9NPG3 1134 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ELOVL5Q9NYP7 299 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SENP1Q9P0U3 644 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 LARSQ9P2J5 1176 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 UVRAGQ9P2Y5 699 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 XPR1Q9UBH6 696 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CTNNAL1Q9UBT7 734 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CNOT8Q9UFF9 292 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 BAIAP2L1Q9UHR4 511 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ANAPC5Q9UJX4 755 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 PNMA2Q9UL42 364 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 NENFQ9UMX5 172 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ADAMTS5Q9UNA0 930 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 USP22Q9UPT9 525 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 NAALADL1Q9UQQ1 740 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ANKRD6Q9Y2G4 727 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SNX24Q9Y343 169 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 COQ4Q9Y3A0 265 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 MRPL11Q9Y3B7 192 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 PLEKHM1Q9Y4G2 1056 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ZHX2Q9Y6X8 837 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 RIC1Q4ADV7 1423 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 TIAM2Q8IVF5 1701 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms