RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 TMPRSS6Q8IU80 811 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 DNAAF3Q8N9W5 541 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 OR52K1Q8NGK4 314 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 FBXO25Q8TCJ0 367 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 PIH1D2Q8WWB5 315 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 ARRDC3Q96B67 414 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 RMDN1Q96DB5 314 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 SIPA1Q96FS4 1042 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 SERPINB12Q96P63 405 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 SRPK1Q96SB4 655 aaKnown RBP18.75■□□□□ 0.59
MCF2L-230ENST00000491028 APOL2Q9BQE5 337 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 HDAC8Q9BY41 377 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 PHACTR1Q9C0D0 580 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 ZDHHC18Q9NUE0 388 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 MTRF1LQ9UGC7 380 aaKnown RBP18.75■□□□□ 0.59
MCF2L-230ENST00000491028 PPIL1Q9Y3C6 166 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 VCANP13611 3396 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 TRIOO75962 3097 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 C16orf96A6NNT2 1141 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 UPK3BL1B0FP48 263 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 ANKRD66B4E2M5 251 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 UPK3BL2E5RIL1 263 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 MID1O15344 667 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 NDUFV2P19404 249 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 MAGEA3P43357 314 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 CHRNA4P43681 627 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 CARSP49589 748 aaKnown RBP18.74■□□□□ 0.59
MCF2L-230ENST00000491028 CCR3P51677 355 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 NEK3P51956 506 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 CCDC15Q0P6D6 951 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 CBLBQ13191 982 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 OLIG2Q13516 323 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 QPCTQ16769 361 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 UGP2Q16851 508 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 WDR93Q6P2C0 686 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 USP45Q70EL2 814 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 ERN2Q76MJ5 926 aaKnown RBP18.74■□□□□ 0.59
MCF2L-230ENST00000491028 ZCCHC9Q8N567 271 aaKnown RBP18.74■□□□□ 0.59
MCF2L-230ENST00000491028 TSTD1Q8NFU3 115 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 IFT81Q8WYA0 676 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.74■□□□□ 0.59
MCF2L-230ENST00000491028 ERLEC1Q96DZ1 483 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 MRGPRX1Q96LB2 322 aa18.74■□□□□ 0.59
MCF2L-230ENST00000491028 PABPC3Q9H361 631 aaKnown RBP18.74■□□□□ 0.59
MCF2L-230ENST00000491028 A0A0J9YYE9 177 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 CAPN8A6NHC0 703 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 GOLGA8MH3BSY2 632 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 PAPSS2O95340 614 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-230ENST00000491028 TRBC1P01850 177 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 GABRG2P18507 467 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 XPAP23025 273 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-230ENST00000491028 DRD3P35462 400 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 GRIA1P42261 906 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 NPY2RP49146 381 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 ARL4CP56559 192 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 MTAPQ13126 283 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 HIF1AQ16665 826 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 ARMC3Q5W041 872 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 CEP128Q6ZU80 1094 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 USP30Q70CQ3 517 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 BMP8AQ7Z5Y6 402 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 KBTBD6Q86V97 674 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 CAND1Q86VP6 1230 aaKnown RBP18.73■□□□□ 0.59
MCF2L-230ENST00000491028 PDIK1LQ8N165 341 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 SLC25A41Q8N5S1 370 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 MYRIPQ8NFW9 859 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 RAB7BQ96AH8 199 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 FAM131CQ96AQ9 280 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 MCCC1Q96RQ3 725 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-230ENST00000491028 TSPYL1Q9H0U9 437 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 EPC1Q9H2F5 836 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 BFARQ9NZS9 450 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 HACD3Q9P035 362 aa18.73■□□□□ 0.59
MCF2L-230ENST00000491028 EIF3HO15372 352 aaKnown RBP eCLIP18.72■□□□□ 0.59
MCF2L-230ENST00000491028 SLC7A4O43246 635 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 CTIFO43310 598 aaKnown RBP18.72■□□□□ 0.59
MCF2L-230ENST00000491028 ACADMP11310 421 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 ADRB3P13945 408 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 TIMP2P16035 220 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 ECHS1P30084 290 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 CXCL12P48061 93 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 METAP1P53582 386 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 POM121L1PQ3SYA9 428 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 DNAJC21Q5F1R6 531 aaKnown RBP18.72■□□□□ 0.59
MCF2L-230ENST00000491028 FBXL19Q6PCT2 694 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 KIAA1324Q6UXG2 1013 aaKnown RBP18.72■□□□□ 0.59
MCF2L-230ENST00000491028 CACUL1Q86Y37 369 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 CAMKK1Q8N5S9 505 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 AADATQ8N5Z0 425 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 HMGB4Q8WW32 186 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 SCRN2Q96FV2 425 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 LYSMD1Q96S90 227 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 FMO2Q99518 471 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 NEUROG2Q9H2A3 272 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 MAGEE1Q9HCI5 957 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 POLR3BQ9NW08 1133 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-230ENST00000491028 FZD4Q9ULV1 537 aa18.72■□□□□ 0.59
MCF2L-230ENST00000491028 NCOR1O75376 2440 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 MYLKQ15746 1914 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 PI15O43692 258 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms