RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 APOL5Q9BWW9 433 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 COG4Q9H9E3 785 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 ASAH2Q9NR71 780 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 KIAA1522Q9P206 1035 aaPredicted RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 PRPF19Q9UMS4 504 aaKnown RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 ASB3Q9Y575 518 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 ZFP37Q9Y6Q3 630 aaPredicted RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 KAT6AQ92794 2004 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 MPP2Q14168 576 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 MPPE1Q53F39 396 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 AGKQ53H12 422 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 ZDHHC20Q5W0Z9 365 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 ESRP1Q6NXG1 681 aaKnown RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 CHST9Q7L1S5 443 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 SNX32Q86XE0 403 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 GPSM1Q86YR5 675 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 UMODL1-AS1Q8N2C9 162 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 SNX31Q8N9S9 440 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 OR10T2Q8NGX3 314 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 PSMG2Q969U7 264 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 C12orf65Q9H3J6 166 aaKnown RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 INTS10Q9NVR2 710 aaKnown RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 MAGEA13PA6NCF6 341 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 ENPP3O14638 875 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 INSIG1O15503 277 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 RFPL1O75677 317 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 IPO13O94829 963 aaKnown RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 RAB6CQ53S08 254 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 FBXL22Q6P050 247 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 CNKSR3Q6P9H4 555 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 MIER2Q8N344 545 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 AGAP2Q99490 1192 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 NDNQ99608 321 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 NMUR2Q9GZQ4 415 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 RAB6CQ9H0N0 254 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 MFSD1Q9H3U5 465 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 PRKAG3Q9UGI9 489 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 A0A1W2PQ67 120 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 ILVBLA1L0T0 632 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 MTMR11A4FU01 709 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 FAM72CH0Y354 149 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 BTN3A1O00481 513 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 AOC2O75106 756 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 OR56A5P0C7T3 313 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 ME2P23368 584 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 SLC11A1P49279 550 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 PPM1FP49593 454 aaPredicted RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 GALNT3Q14435 633 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 ZNF284Q2VY69 593 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 MS4A13Q5J8X5 152 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 SWT1Q5T5J6 900 aaKnown RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 FAM72AQ5TYM5 149 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 FAM72DQ6L9T8 149 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 FAM72BQ86X60 149 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 RAB42Q8N4Z0 105 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 SNX19Q92543 992 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 GPR22Q99680 433 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 ARHGAP39Q9C0H5 1083 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 KLHL4Q9C0H6 718 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 SIRPGQ9P1W8 387 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 TSR3Q9UJK0 312 aaKnown RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 CROTQ9UKG9 612 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 PCDHB1Q9Y5F3 818 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 VGLL3A8MV65 326 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 SLC26A3P40879 764 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 ARHGDIAP52565 204 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 AP1S1P61966 158 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 PITX1P78337 314 aaPredicted RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 ADAM17P78536 824 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 NRG1Q02297 640 aaPredicted RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 UBAP2LQ14157 1087 aaKnown RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 TAF1AQ15573 450 aaPredicted RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 RALGPS1Q5JS13 557 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 CERS6Q6ZMG9 384 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 COLGALT2Q8IYK4 626 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 CLYBLQ8N0X4 340 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 PTGR2Q8N8N7 351 aaPredicted RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 UCMAQ8WVF2 138 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 BHMTQ93088 406 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 CACYBPQ9HB71 228 aaKnown RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 MTMR10Q9NXD2 777 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 NR2E3Q9Y5X4 410 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 RNF103-CHMP3A0A140T963 221 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 PSMD12O00232 456 aaPredicted RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 TRIM16O95361 564 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 LBPP18428 481 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 MPP1Q00013 466 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 SULT2A1Q06520 285 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 NIPAL4Q0D2K0 466 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 CAPRIN2Q6IMN6 1127 aaKnown RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 TRNP1Q6NT89 227 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 LRRC74BQ6ZQY2 392 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 TMEM135Q86UB9 458 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 ZNF280BQ86YH2 543 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 CFAP52Q8N1V2 620 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 POU5F2Q8N7G0 328 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 PEX13Q92968 403 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 NCLNQ969V3 563 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 EME1Q96AY2 570 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms