RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 SRP54P61011 504 aaKnown RBP11.88□□□□□ -0.51
FDPS-215ENST00000490140 POLR2LP62875 67 aaKnown RBP11.88□□□□□ -0.51
FDPS-215ENST00000490140 PEX6Q13608 980 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 AGERQ15109 404 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 UGP2Q16851 508 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 ALG11Q2TAA5 492 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 LRRC73Q5JTD7 316 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 ARTNQ5T4W7 220 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 TMEM164Q5U3C3 297 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 KIAA1614Q5VZ46 1190 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 ENPP7Q6UWV6 458 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 LEKR1Q6ZMV7 388 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 RD3Q7Z3Z2 195 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 CCNJLQ8IV13 435 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 C3orf20Q8ND61 904 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 KIAA1524Q8TCG1 905 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 GPT2Q8TD30 523 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 CENPIQ92674 756 aaPredicted RBP11.88□□□□□ -0.51
FDPS-215ENST00000490140 SGF29Q96ES7 293 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 HMCESQ96FZ2 354 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 RBM15Q96T37 977 aaKnown RBP eCLIP11.88□□□□□ -0.51
FDPS-215ENST00000490140 EIF3CQ99613 913 aaKnown RBP11.88□□□□□ -0.51
FDPS-215ENST00000490140 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.88□□□□□ -0.51
FDPS-215ENST00000490140 APOOQ9BUR5 198 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 ATP13A3Q9H7F0 1226 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 MBNL1Q9NR56 388 aaKnown RBP11.88□□□□□ -0.51
FDPS-215ENST00000490140 KCTD5Q9NXV2 234 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 ADAM22Q9P0K1 906 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 UBA2Q9UBT2 640 aaPredicted RBP11.88□□□□□ -0.51
FDPS-215ENST00000490140 NOCTQ9UK39 431 aaKnown RBP11.88□□□□□ -0.51
FDPS-215ENST00000490140 NEU3Q9UQ49 428 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 ATP8A1Q9Y2Q0 1164 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 ACTL7AQ9Y615 435 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 DGKBQ9Y6T7 804 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 HECTD1Q9ULT8 2610 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 RASA4BC9J798 803 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 FAM72CH0Y354 149 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 RASA4O43374 803 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 CREB3O43889 395 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 WISP1O95388 367 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 TIMP2P16035 220 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 SOX5P35711 763 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 MMP12P39900 470 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 KIAA1024LP59773 190 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 SERINC3Q13530 473 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 ARHGEF7Q14155 803 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 INPP5AQ14642 412 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 HSP90AA4PQ58FG1 418 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 TCP11X2Q5H9J9 407 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 MANEAQ5SRI9 462 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 FAM72AQ5TYM5 149 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 FAM72DQ6L9T8 149 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 PPP1R2P3Q6NXS1 205 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 DNAJC24Q6P3W2 148 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 FAM72BQ86X60 149 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 UMODL1-AS1Q8N2C9 162 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 CCDC185Q8N715 623 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 ANKRD20A12PQ8NF67 263 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 TSACCQ96A04 125 aaPredicted RBP11.87□□□□□ -0.51
FDPS-215ENST00000490140 B3GNT4Q9C0J1 378 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 LRRN3Q9H3W5 708 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 SUV39H2Q9H5I1 410 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 CAAP1Q9H8G2 361 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 PCDH12Q9NPG4 1184 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 PISDQ9UG56 409 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 APPL1Q9UKG1 709 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 LOXL2Q9Y4K0 774 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 UNC13CQ8NB66 2214 aa11.87□□□□□ -0.51
FDPS-215ENST00000490140 LRP4O75096 1905 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 FAM170AA1A519 330 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 ARHGAP42A6NI28 874 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 WASH4PA8MWX3 477 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 TNFRSF10CO14798 259 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 NUDT21O43809 227 aaKnown RBP11.86□□□□□ -0.51
FDPS-215ENST00000490140 PCCBP05166 539 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 ELFN1P0C7U0 828 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 CCDC172P0C7W6 258 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 STAT1P42224 750 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 LIG3P49916 1009 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 CSRP3P50461 194 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 ZNF143P52747 638 aaPredicted RBP11.86□□□□□ -0.51
FDPS-215ENST00000490140 NDST2P52849 883 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 TPI1P60174 286 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 CCL7P80098 99 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 FMO1Q01740 532 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 BIRC2Q13490 618 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 CLPPQ16740 277 aaPredicted RBP11.86□□□□□ -0.51
FDPS-215ENST00000490140 WSCD2Q2TBF2 565 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 DPCR1Q3MIW9 517 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 MAP9Q49MG5 647 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 CERCAMQ5T4B2 595 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 SCYL2Q6P3W7 929 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 TAF8Q7Z7C8 310 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 CCDC112Q8NEF3 446 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 OR56A4Q8NGH8 313 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 JOSD2Q8TAC2 188 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 SLC30A5Q8TAD4 765 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 SLC20A1Q8WUM9 679 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 CNPY3Q9BT09 278 aa11.86□□□□□ -0.51
FDPS-215ENST00000490140 FOXP3Q9BZS1 431 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms