RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 NFE2L3Q9Y4A8 694 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 SNX9Q9Y5X1 595 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 A3GALT2U3KPV4 340 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 PRR23AA6NEV1 266 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 HNRNPCL2B2RXH8 293 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 KLK10O43240 276 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 KLK8O60259 260 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 ZIC3O60481 467 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 TSPAN3O60637 253 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 LMX1BO60663 402 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 PCNAP12004 261 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 ANOS1P23352 680 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 HNRNPH1P31943 449 aaKnown RBP3.83□□□□□ -1.8
HMGN1-218ENST00000490032 TRAPPC10P48553 1259 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 RHBDL3P58872 404 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 ZBTB17Q13105 803 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 TNFAIP1Q13829 316 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 RBM39Q14498 530 aaKnown RBP3.83□□□□□ -1.8
HMGN1-218ENST00000490032 MRGPRG-AS1Q2M3A8 158 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 FBXO47Q5MNV8 452 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 STPG1Q5TH74 334 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 ANKRD45Q5TZF3 282 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 CES5AQ6NT32 575 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 FAM122CQ6P4D5 195 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 FOXL2NBQ6ZUU3 175 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 NOL8Q76FK4 1167 aaKnown RBP3.83□□□□□ -1.8
HMGN1-218ENST00000490032 TBC1D26Q86UD7 250 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 C2CD5Q86YS7 1000 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 PARP16Q8N5Y8 322 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 ZNF441Q8N8Z8 693 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 LSM14AQ8ND56 463 aaKnown RBP3.83□□□□□ -1.8
HMGN1-218ENST00000490032 GJC3Q8NFK1 279 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 SPATA22Q8NHS9 363 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 LNX1Q8TBB1 728 aaPredicted RBP3.83□□□□□ -1.8
HMGN1-218ENST00000490032 NEK9Q8TD19 979 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 CREB3L4Q8TEY5 395 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 CD101Q93033 1021 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 ERGIC1Q969X5 290 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 TBC1D20Q96BZ9 403 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 MMP28Q9H239 520 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 SLC32A1Q9H598 525 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 NOX4Q9NPH5 578 aa3.83□□□□□ -1.8
HMGN1-218ENST00000490032 GREB1LQ9C091 1923 aaPredicted RBP3.83□□□□□ -1.8
HMGN1-218ENST00000490032 ATXN2Q99700 1313 aaKnown RBP3.82□□□□□ -1.8
HMGN1-218ENST00000490032 ZNF587BE7ETH6 402 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 XPNPEP2O43895 674 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 NDUFS7O75251 213 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 SRCP12931 536 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 GLIPR1P48060 266 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 CLDN2P57739 230 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 RUNX2Q13950 521 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 NAA25Q14CX7 972 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 ARHGEF6Q15052 776 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 ATP13A5Q4VNC0 1218 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 C10orf62Q5T681 223 aaPredicted RBP3.82□□□□□ -1.8
HMGN1-218ENST00000490032 NKAPQ8N5F7 415 aaKnown RBP3.82□□□□□ -1.8
HMGN1-218ENST00000490032 TANKQ92844 425 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 FEM1CQ96JP0 617 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 C3orf30Q96M34 536 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 UHRF2Q96PU4 802 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 CSF3RQ99062 836 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 REEP2Q9BRK0 252 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 SMYD2Q9NRG4 433 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 ALKBH4Q9NXW9 302 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 CDC14AQ9UNH5 594 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 PCDHAC2Q9Y5I4 1007 aa3.82□□□□□ -1.8
HMGN1-218ENST00000490032 CGNL1Q0VF96 1302 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 MID1O15344 667 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 TIPRLO75663 272 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 RFPL2O75678 378 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 MTA2O94776 668 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 SLC2A4P14672 509 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 CD58P19256 250 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 MCM3P25205 808 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 ZNF132P52740 706 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 NLRP5P59047 1200 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 WDR45BQ5MNZ6 344 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 BBS12Q6ZW61 710 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 FAM160B2Q86V87 743 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 SATL1Q86VE3 508 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 MAB21L3Q8N8X9 362 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 CCT6BQ92526 530 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 FIG4Q92562 907 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 PHF7Q9BWX1 381 aaPredicted RBP3.81□□□□□ -1.8
HMGN1-218ENST00000490032 ITM2CQ9NQX7 267 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 CISD1Q9NZ45 108 aaKnown RBP3.81□□□□□ -1.8
HMGN1-218ENST00000490032 VDAC3Q9Y277 283 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 CARD8Q9Y2G2 431 aa3.81□□□□□ -1.8
HMGN1-218ENST00000490032 GOLGA6L10A0A0M3HER8 536 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 SOCS6O14544 535 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 PLRG1O43660 514 aaKnown RBP3.8□□□□□ -1.8
HMGN1-218ENST00000490032 STX2P32856 288 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 CHRNDQ07001 517 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 RBBP5Q15291 538 aaKnown RBP3.8□□□□□ -1.8
HMGN1-218ENST00000490032 ACCSLQ4AC99 568 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 PAPPA-AS1Q5QFB9 102 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 MAP3K21Q5TCX8 1036 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 SERTAD4-AS1Q5TG53 156 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 ZNF449Q6P9G9 518 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 GDPD4Q6W3E5 623 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms