RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 GRIK2Q13002 908 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 STARD3Q14849 445 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 EIF4HQ15056 248 aaKnown RBP6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 TRIP6Q15654 476 aaKnown RBP6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 PLEKHG6Q3KR16 790 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 COBLL1Q53SF7 1204 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 WDR45BQ5MNZ6 344 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 LRSAM1Q6UWE0 723 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 CCNI2Q6ZMN8 369 aaPredicted RBP6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 KRBA2Q6ZNG9 492 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 ANKS1BQ7Z6G8 1248 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 DENND1CQ8IV53 801 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 UBR7Q8N806 425 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 FBXL13Q8NEE6 735 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 SPATA20Q8TB22 786 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 SORCS1Q8WY21 1168 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 NDRG1Q92597 394 aaKnown RBP6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 JAKMIP2Q96AA8 810 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 ERLEC1Q96DZ1 483 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 SIPA1Q96FS4 1042 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 LMLNQ96KR4 655 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 NUP58Q9BVL2 599 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 PCED1AQ9H1Q7 454 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 GOLPH3LQ9H4A5 285 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 PRDM16Q9HAZ2 1276 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 SFMBT1Q9UHJ3 866 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 RASAL2Q9UJF2 1139 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 CBLCQ9ULV8 474 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 ATP23Q9Y6H3 246 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 APC2O95996 2303 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 PCDH15Q96QU1 1955 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 PLXND1Q9Y4D7 1925 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 IGSF10Q6WRI0 2623 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 CABIN1Q9Y6J0 2220 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 ADAMTS20P59510 1910 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 SLC12A8A0AV02 714 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 ZNF839A8K0R7 811 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 ACOT7O00154 380 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 XPO1O14980 1071 aaKnown RBP6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 PMM2O15305 246 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 BCAT2O15382 392 aaPredicted RBP6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 ZNF202O95125 648 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 LATS1O95835 1130 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 IGLV3-27P01718 113 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 HMBSP08397 361 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 FTH1P19P0C7X4 201 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 PRKCHP24723 683 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 HLA-FP30511 346 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 RDXP35241 583 aaKnown RBP6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 MXI1P50539 228 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 TKTL1P51854 596 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 KRT85P78386 507 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 E2F5Q15329 346 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 CBWD6Q4V339 395 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 FIGNQ5HY92 759 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 CBWD3Q5JTY5 395 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 CBWD5Q5RIA9 395 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 DCAF12L1Q5VU92 463 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 BSPRYQ5W0U4 402 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 KIAA1324Q6UXG2 1013 aaKnown RBP6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 ADIPOR2Q86V24 386 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 FMNL3Q8IVF7 1028 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 NAXDQ8IW45 347 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 HSCBQ8IWL3 235 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 OR2T3Q8NH03 318 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 DDI1Q8WTU0 396 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 SLC35F5Q8WV83 523 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 UCMAQ8WVF2 138 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 EEF2KMTQ96G04 330 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 ORAI3Q9BRQ5 295 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 GPR174Q9BXC1 333 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 ULBP1Q9BZM6 244 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 DNAI2Q9GZS0 605 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 IL21RQ9HBE5 538 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 BARX1Q9HBU1 254 aaPredicted RBP6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 KIAA1257Q9ULG3 409 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 HBS1LQ9Y450 684 aaKnown RBP6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 PCDHGB2Q9Y5G2 931 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 SLCO1B1Q9Y6L6 691 aa6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 TNRC6BQ9UPQ9 1833 aaKnown RBP6.61□□□□□ -1.35
PRPF40A-210ENST00000489741 ASXL3Q9C0F0 2248 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 YJEFN3A6XGL0 299 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 E7ENQ6 273 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 O00370 1275 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 CETN3O15182 167 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 SLC16A3O15427 465 aaKnown RBP6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 STX10O60499 249 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 SYNCRIPO60506 623 aaKnown RBP6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 TSPAN3O60637 253 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 CLSTN1O94985 981 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 RASGRP1O95267 797 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 PLATP00750 562 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 AMY2AP04746 511 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 VDRP11473 427 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 AMY2BP19961 511 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 ACSL1P33121 698 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 PRCPP42785 496 aa6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 RPL34P49207 117 aaKnown RBP6.6□□□□□ -1.35
PRPF40A-210ENST00000489741 HARS2P49590 506 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms