RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ITIH1P19827 911 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 CCKBRP32239 447 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 CSRP3P50461 194 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 HDAC4P56524 1084 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 NFKB2Q00653 900 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 ELP6Q0PNE2 266 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 NFATC4Q14934 902 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 STRADAQ7RTN6 431 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 MLKLQ8NB16 471 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 SLC30A5Q8TAD4 765 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 FAM172AQ8WUF8 416 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 NCAPGQ9BPX3 1015 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 C11orf70Q9BRQ4 267 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 STK33Q9BYT3 514 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 ACSL6Q9UKU0 697 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 LOXL2Q9Y4K0 774 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 F8VZ95 297 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 TNFP01375 233 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 PCCBP05166 539 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 MMP8P22894 467 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 PTPN9P43378 593 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 CYTH1Q15438 398 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 INO80DQ53TQ3 878 aaPredicted RBP17.11■□□□□ 0.33
TOP3B-217ENST00000489581 CCNJLQ8IV13 435 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 GPR156Q8NFN8 814 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 OR6C4Q8NGE1 309 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 CASKIN2Q8WXE0 1202 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 CENPIQ92674 756 aaPredicted RBP17.11■□□□□ 0.33
TOP3B-217ENST00000489581 HMCESQ96FZ2 354 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 PDXPQ96GD0 296 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 WDR92Q96MX6 357 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 PCDH12Q9NPG4 1184 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 LHX3Q9UBR4 397 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 IL17BQ9UHF5 180 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 DAAM1Q9Y4D1 1078 aa17.11■□□□□ 0.33
TOP3B-217ENST00000489581 PRAMEF33A0A0G2JMD5 474 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 RASA4BC9J798 803 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 NVLO15381 856 aaKnown RBP17.1■□□□□ 0.33
TOP3B-217ENST00000489581 RASA4O43374 803 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 PRAMEF10O60809 474 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 GFPT2O94808 682 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 CYP1A1P04798 512 aaPredicted RBP17.1■□□□□ 0.33
TOP3B-217ENST00000489581 LIPCP11150 499 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 CHRNB2P17787 502 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 EPHB2P29323 1055 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 ETV5P41161 510 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 FMO1Q01740 532 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 UGP2Q16851 508 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 TAF8Q7Z7C8 310 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 VASH2Q86V25 355 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 SFTPA2Q8IWL1 248 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 RTL3Q8N8U3 475 aaKnown RBP17.1■□□□□ 0.33
TOP3B-217ENST00000489581 PLA2G15Q8NCC3 412 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 SUV39H2Q9H5I1 410 aa17.1■□□□□ 0.33
TOP3B-217ENST00000489581 NOCTQ9UK39 431 aaKnown RBP17.1■□□□□ 0.33
TOP3B-217ENST00000489581 SDK2Q58EX2 2172 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 CREB3O43889 395 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 PRKCGP05129 697 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 FAM87AP0C7U9 286 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 RFC1P35251 1148 aaPredicted RBP17.09■□□□□ 0.33
TOP3B-217ENST00000489581 LIG3P49916 1009 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 SUOXP51687 545 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 MAPK10P53779 464 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 YBEYP58557 167 aaPredicted RBP17.09■□□□□ 0.33
TOP3B-217ENST00000489581 CDR2Q01850 454 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 ZFP36L1Q07352 338 aaKnown RBP17.09■□□□□ 0.33
TOP3B-217ENST00000489581 MTM1Q13496 603 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 SERINC3Q13530 473 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 MANEAQ5SRI9 462 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 XKR5Q6UX68 686 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 SLFN11Q7Z7L1 901 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 ZFAND4Q86XD8 727 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 ZNF677Q86XU0 584 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 FAM46DQ8NEK8 389 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 ATL2Q8NHH9 583 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 OR1E3Q8WZA6 343 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 USP7Q93009 1102 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 NTAN1Q96AB6 310 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 RBM15Q96T37 977 aaKnown RBP eCLIP17.09■□□□□ 0.33
TOP3B-217ENST00000489581 MRPL40Q9NQ50 206 aaKnown RBP17.09■□□□□ 0.33
TOP3B-217ENST00000489581 STARD5Q9NSY2 213 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 SEPT10Q9P0V9 454 aa17.09■□□□□ 0.33
TOP3B-217ENST00000489581 TSPAN11A1L157 253 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 TMEM202A6NGA9 273 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 BUB1BO60566 1050 aaPredicted RBP17.08■□□□□ 0.32
TOP3B-217ENST00000489581 ITGB2P05107 769 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 KRT3P12035 628 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 GLB1P16278 677 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 ITGB6P18564 788 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 CFAP58Q5T655 872 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 ERAP2Q6P179 960 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 SCYL2Q6P3W7 929 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 WDR59Q6PJI9 974 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 OGFOD3Q6PK18 319 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 TMPRSS9Q7Z410 1059 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 DNAAF5Q86Y56 855 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 CAMK1DQ8IU85 385 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 HCAR2Q8TDS4 363 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 FOXJ2Q9P0K8 574 aa17.08■□□□□ 0.32
TOP3B-217ENST00000489581 LRIT1Q9P2V4 623 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms