RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 J3KR12 359 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 BUB1BO60566 1050 aaPredicted RBP12.5□□□□□ -0.41
CPSF3-204ENST00000489403 TNFSF15O95150 251 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 RASGRP1O95267 797 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 PRKCGP05129 697 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 PCCBP05166 539 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 ALPIP09923 528 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 CTSEP14091 401 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 MMP12P39900 470 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 COPB1P53618 953 aaKnown RBP12.5□□□□□ -0.41
CPSF3-204ENST00000489403 AIF1P55008 147 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 CLN3Q13286 438 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 INPP5AQ14642 412 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 AGERQ15109 404 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 UGP2Q16851 508 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 PPP1R15BQ5SWA1 713 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 KCTD16Q68DU8 428 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 B3GNT8Q7Z7M8 397 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 HID1Q8IV36 788 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 ARL14Q8N4G2 192 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 HCAR2Q8TDS4 363 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 CCDC74AQ96AQ1 378 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 LIN37Q96GY3 246 aaPredicted RBP12.5□□□□□ -0.41
CPSF3-204ENST00000489403 APOOQ9BUR5 198 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 FANCLQ9NW38 375 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 OR1A2Q9Y585 309 aa12.5□□□□□ -0.41
CPSF3-204ENST00000489403 A0A1W2PQM1 296 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 CAPN8A6NHC0 703 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 FGF10O15520 208 aaPredicted RBP12.49□□□□□ -0.41
CPSF3-204ENST00000489403 ITGA2BP08514 1039 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 HTR1BP28222 390 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 MLLT3P42568 568 aaPredicted RBP12.49□□□□□ -0.41
CPSF3-204ENST00000489403 RGRP47804 291 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 LIG3P49916 1009 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 TPI1P60174 286 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 SRP54P61011 504 aaKnown RBP12.49□□□□□ -0.41
CPSF3-204ENST00000489403 OGDHQ02218 1023 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 LY6DQ14210 128 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 GRM3Q14832 879 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 KIAA1614Q5VZ46 1190 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 ERAP2Q6P179 960 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 BRAT1Q6PJG6 821 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 LVRNQ6Q4G3 990 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 RD3Q7Z3Z2 195 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 GKN2Q86XP6 184 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 SDR16C5Q8N3Y7 309 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 NEK11Q8NG66 645 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 SCG3Q8WXD2 468 aaKnown RBP12.49□□□□□ -0.41
CPSF3-204ENST00000489403 PDXPQ96GD0 296 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 CELF6Q96J87 481 aaKnown RBP12.49□□□□□ -0.41
CPSF3-204ENST00000489403 PCMTD1Q96MG8 357 aaPredicted RBP12.49□□□□□ -0.41
CPSF3-204ENST00000489403 ZNF641Q96N77 438 aaPredicted RBP12.49□□□□□ -0.41
CPSF3-204ENST00000489403 GFM1Q96RP9 751 aaKnown RBP12.49□□□□□ -0.41
CPSF3-204ENST00000489403 AGPAT1Q99943 283 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 CNPY3Q9BT09 278 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 EPB41L5Q9HCM4 733 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 KLQ9UEF7 1012 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 GPR34Q9UPC5 381 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 ATP8A1Q9Y2Q0 1164 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 SCN8AQ9UQD0 1980 aa12.49□□□□□ -0.41
CPSF3-204ENST00000489403 ANKRD62A6NC57 917 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 LGALS16A8MUM7 142 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 D6RAR5 112 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 PLD2O14939 933 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 PRAMEF11O60813 436 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 RPLP0P05388 317 aaKnown RBP12.48□□□□□ -0.41
CPSF3-204ENST00000489403 HTR7P34969 479 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 NDST2P52849 883 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 CCL7P80098 99 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 RALGDSQ12967 914 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 MTM1Q13496 603 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 ZSCAN23Q3MJ62 389 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 CFAP58Q5T655 872 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 CCDC81Q6ZN84 652 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 CAMK1DQ8IU85 385 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 MCOLN2Q8IZK6 566 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 PLA2G15Q8NCC3 412 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 TSEN2Q8NCE0 465 aaKnown RBP12.48□□□□□ -0.41
CPSF3-204ENST00000489403 GPR156Q8NFN8 814 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 WDR92Q96MX6 357 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 TUBGCP5Q96RT8 1024 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 RBM15Q96T37 977 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPSF3-204ENST00000489403 FOXP3Q9BZS1 431 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 SLC39A8Q9C0K1 460 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 GPATCH2LQ9NWQ4 482 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 LIMA1Q9UHB6 759 aaKnown RBP12.48□□□□□ -0.41
CPSF3-204ENST00000489403 AP4E1Q9UPM8 1137 aa12.48□□□□□ -0.41
CPSF3-204ENST00000489403 TMEM202A6NGA9 273 aa12.47□□□□□ -0.41
CPSF3-204ENST00000489403 TNFP01375 233 aa12.47□□□□□ -0.41
CPSF3-204ENST00000489403 HGFP14210 728 aa12.47□□□□□ -0.41
CPSF3-204ENST00000489403 UGT1A5P35504 534 aa12.47□□□□□ -0.41
CPSF3-204ENST00000489403 PAPOLAP51003 745 aaKnown RBP12.47□□□□□ -0.41
CPSF3-204ENST00000489403 INHBCP55103 352 aa12.47□□□□□ -0.41
CPSF3-204ENST00000489403 KIAA1024LP59773 190 aa12.47□□□□□ -0.41
CPSF3-204ENST00000489403 EIF3IQ13347 325 aaKnown RBP12.47□□□□□ -0.41
CPSF3-204ENST00000489403 CA9Q16790 459 aa12.47□□□□□ -0.41
CPSF3-204ENST00000489403 ACAD10Q6JQN1 1059 aa12.47□□□□□ -0.41
CPSF3-204ENST00000489403 DCUN1D2Q6PH85 259 aa12.47□□□□□ -0.41
CPSF3-204ENST00000489403 RBM43Q6ZSC3 357 aaKnown RBP12.47□□□□□ -0.41
CPSF3-204ENST00000489403 RAB11FIP2Q7L804 512 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms