RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 LCLAT1Q6UWP7 414 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 PAQR9Q6ZVX9 377 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 GAREM2Q75VX8 874 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 MTSS1LQ765P7 747 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 APTXQ7Z2E3 356 aaKnown RBP8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 TMC8Q8IU68 726 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 KBTBD2Q8IY47 623 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 STKLD1Q8NE28 680 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 ITFG1Q8TB96 612 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 FEZF2Q8TBJ5 459 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 FBXO32Q969P5 355 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 IQCDQ96DY2 449 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 SMOQ99835 787 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 UBXN6Q9BZV1 441 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 GANQ9H2C0 597 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 LRRC4Q9HBW1 653 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 CSNK1G1Q9HCP0 422 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 NLRC4Q9NPP4 1024 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 TRPM5Q9NZQ8 1165 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 IFNKQ9P0W0 207 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 SIK3Q9Y2K2 1263 aa8.37□□□□□ -1.07
TRAPPC12-221ENST00000489032 F8VZ95 297 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 XPO1O14980 1071 aaKnown RBP8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 TEX33O43247 280 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 TPM1P09493 284 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 ZNF888P0CJ79 500 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 LAMP2P13473 410 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 HMGA1P17096 107 aaKnown RBP8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 CEBPBP17676 345 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 MTNR1BP49286 362 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 KLK7P49862 253 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 CACNA2D1P54289 1103 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 UBXN2BQ14CS0 331 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 TEAD2Q15562 447 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 CSRP2Q16527 193 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 LPAL2Q16609 132 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 MEA1Q16626 185 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 CLEC20AQ6ZU45 233 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 USP30Q70CQ3 517 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 LYSMD2Q8IV50 215 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 FAM71AQ8IYT1 594 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 BCL6BQ8N143 479 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 SIX6OS1Q8N1H7 587 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 CELF5Q8N6W0 485 aaKnown RBP8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 PPM1NQ8N819 430 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 ZNF397Q8NF99 534 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 UBA3Q8TBC4 463 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 ZNF606Q8WXB4 792 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 ING5Q8WYH8 240 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 OVCA2Q8WZ82 227 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 FGF13Q92913 245 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 TCEAL4Q96EI5 215 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 MCRS1Q96EZ8 462 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 NAP1L5Q96NT1 182 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 KCNK16Q96T55 309 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 NAA15Q9BXJ9 866 aaKnown RBP8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 EDEM3Q9BZQ6 932 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 OR10A2Q9H208 303 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 ZNF334Q9HCZ1 680 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 IP6K2Q9UHH9 426 aa8.36□□□□□ -1.07
TRAPPC12-221ENST00000489032 MYH10P35580 1976 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 TRAV19A0A0A6YYK7 116 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 NCAM2O15394 837 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 BEST1O76090 585 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 GFPT2O94808 682 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 CELA3BP08861 270 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 HNRNPLP14866 589 aaKnown RBP eCLIP8.35□□□□□ -1.072e-11■■■■□ 19.4
TRAPPC12-221ENST00000489032 FERP16591 822 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 GJA1P17302 382 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 AVPR1AP37288 418 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 ACADSBP45954 432 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 SLC16A1P53985 500 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 TAF10Q12962 218 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 PIN1Q13526 163 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 SLC5A9Q2M3M2 681 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 AGBL4Q5VU57 503 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 TSSK4Q6SA08 328 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 LARP4Q71RC2 724 aaKnown RBP eCLIP8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 PIGZQ86VD9 579 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 SLC47A2Q86VL8 602 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 TTC30AQ86WT1 665 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 ZNF677Q86XU0 584 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 SLC41A1Q8IVJ1 513 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 LGI4Q8N135 537 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 ARHGAP18Q8N392 663 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 MSANTD4Q8NCY6 345 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 ZMIZ2Q8NF64 920 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 TFAP2BQ92481 460 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 JADE3Q92613 823 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 GOLGA1Q92805 767 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 HSFY1Q96LI6 401 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 SLC2A13Q96QE2 648 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 MYADMQ96S97 322 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 DDX23Q9BUQ8 820 aaKnown RBP8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 ADI1Q9BV57 179 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 TTLL2Q9BWV7 592 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 XPO4Q9C0E2 1151 aaKnown RBP8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 NACA2Q9H009 215 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 TASP1Q9H6P5 420 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 ZFP14Q9HCL3 533 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms