RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 HACD1B0YJ81 288 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 H7C0C1 242 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 RNF103O00237 685 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 LAMTOR5O43504 91 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 GJB3O75712 270 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 GSRP00390 522 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 TDGF1P13385 188 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 TSHRP16473 764 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 NDUFV2P19404 249 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 STIP1P31948 543 aaKnown RBP19.54■□□□□ 0.72
CCM2-216ENST00000488727 ATP5OP48047 213 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 CCNHP51946 323 aaPredicted RBP19.54■□□□□ 0.72
CCM2-216ENST00000488727 ARL4CP56559 192 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 PPARDQ03181 441 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 ELAVL3Q14576 367 aaKnown RBP19.54■□□□□ 0.72
CCM2-216ENST00000488727 ZNF235Q14590 738 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 HIF1AQ16665 826 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 ANO7Q6IWH7 933 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 CACUL1Q86Y37 369 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 PLPP6Q8IY26 295 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 C10orf67Q8IYJ2 551 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 MDGA1Q8NFP4 955 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 NSMCE1Q8WV22 266 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 HMGB4Q8WW32 186 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 MRGPRX1Q96LB2 322 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 IL12RB2Q99665 862 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 CEP41Q9BYV8 373 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 RSPH9Q9H1X1 276 aaPredicted RBP19.54■□□□□ 0.72
CCM2-216ENST00000488727 RASSF4Q9H2L5 321 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 EML5Q05BV3 1969 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 EXOC1LA0A1B0GW35 172 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 CPP00450 1065 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 CTSLP07711 333 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 GCAP28676 217 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 RBL1P28749 1068 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 GKP32189 559 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 PXNP49023 591 aaPredicted RBP19.54■□□□□ 0.72
CCM2-216ENST00000488727 RENBPP51606 427 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 MAXP61244 160 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 SNRPD1P62314 119 aaKnown RBP19.54■□□□□ 0.72
CCM2-216ENST00000488727 FASTKD3Q14CZ7 662 aaKnown RBP19.54■□□□□ 0.72
CCM2-216ENST00000488727 RASSF3Q86WH2 238 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 CYP4X1Q8N118 509 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 CNTD1Q8N815 330 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 RBM22Q9NW64 420 aaKnown RBP eCLIP19.54■□□□□ 0.72
CCM2-216ENST00000488727 SEPT10Q9P0V9 454 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 HECAQ9UBI9 543 aaPredicted RBP19.54■□□□□ 0.72
CCM2-216ENST00000488727 SLC24A2Q9UI40 661 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 TTC24A2A3L6 582 aaPredicted RBP19.53■□□□□ 0.72
CCM2-216ENST00000488727 CFAP69A5D8W1 941 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 JCHAINP01591 159 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 HLA-DQB2P05538 268 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 RECQLP46063 649 aaPredicted RBP19.53■□□□□ 0.72
CCM2-216ENST00000488727 WASHC5Q12768 1159 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 PDIA2Q13087 525 aaKnown RBP19.53■□□□□ 0.72
CCM2-216ENST00000488727 TMPRSS6Q8IU80 811 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 ZBED8Q8IZ13 594 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 CAMKK1Q8N5S9 505 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 OTUD6BQ8N6M0 293 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 HTR3CQ8WXA8 447 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 OR8D1Q8WZ84 308 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 RTP4Q96DX8 246 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 MGME1Q9BQP7 344 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 NSRP1Q9H0G5 558 aaKnown RBP19.53■□□□□ 0.72
CCM2-216ENST00000488727 NT5MQ9NPB1 228 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 EVLQ9UI08 416 aaPredicted RBP19.53■□□□□ 0.72
CCM2-216ENST00000488727 SARDHQ9UL12 918 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.53■□□□□ 0.72
CCM2-216ENST00000488727 WASF2Q9Y6W5 498 aa19.53■□□□□ 0.72
CCM2-216ENST00000488727 ANKRD65E5RJM6 399 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 INSIG1O15503 277 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 APBB3O95704 486 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 IGSF6O95976 241 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 C7P10643 843 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 BRAFP15056 766 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 CR2P20023 1033 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 PTPN3P26045 913 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 METAP1P53582 386 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 NRLP54845 237 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 DMWDQ09019 674 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 ANKRD22Q5VYY1 191 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 HEATR6Q6AI08 1181 aaKnown RBP19.52■□□□□ 0.72
CCM2-216ENST00000488727 DARS2Q6PI48 645 aaKnown RBP19.52■□□□□ 0.72
CCM2-216ENST00000488727 PIGWQ7Z7B1 504 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 MMAAQ8IVH4 418 aaKnown RBP19.52■□□□□ 0.72
CCM2-216ENST00000488727 CDKL3Q8IVW4 592 aaPredicted RBP19.52■□□□□ 0.72
CCM2-216ENST00000488727 LRRC34Q8IZ02 419 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 RYBPQ8N488 228 aaPredicted RBP19.52■□□□□ 0.72
CCM2-216ENST00000488727 GRIN3AQ8TCU5 1115 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 NSMCE3Q96MG7 304 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 FBRSQ9HAH7 460 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 USP29Q9HBJ7 922 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 PPM1HQ9ULR3 514 aa19.52■□□□□ 0.72
CCM2-216ENST00000488727 BCLAF3A2AJT9 711 aaKnown RBP19.51■□□□□ 0.71
CCM2-216ENST00000488727 CREB1P16220 341 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 PHBP35232 272 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 RPS14P62263 151 aaKnown RBP19.51■□□□□ 0.71
CCM2-216ENST00000488727 CSTF1Q05048 431 aaKnown RBP19.51■□□□□ 0.71
CCM2-216ENST00000488727 NSUN2Q08J23 767 aaKnown RBP eCLIP19.51■□□□□ 0.71
CCM2-216ENST00000488727 MYLK3Q32MK0 819 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms