RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 ECT2LQ008S8 904 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 CAP1Q01518 475 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 CNPY1Q3B7I2 92 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 AGKQ53H12 422 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 PIGGQ5H8A4 983 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 IL23RQ5VWK5 629 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 RAP1GAP2Q684P5 730 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 SLC30A9Q6PML9 568 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 MRPL10Q7Z7H8 261 aaKnown RBP12.76□□□□□ -0.37
CLIC4-202ENST00000488683 PGBD5Q8N414 524 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 DCBLD1Q8N8Z6 715 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 C2CD4AQ8NCU7 369 aaPredicted RBP12.76□□□□□ -0.37
CLIC4-202ENST00000488683 OR13J1Q8NGT2 312 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 GRIN3AQ8TCU5 1115 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 ESAMQ96AP7 390 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 NSUN5Q96P11 429 aaKnown RBP12.76□□□□□ -0.37
CLIC4-202ENST00000488683 SMOC2Q9H3U7 446 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 ZDHHC7Q9NXF8 308 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 NCKIPSDQ9NZQ3 722 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 MID2Q9UJV3 735 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 PSMD3O43242 534 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 TRPA1O75762 1119 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 RNASEH2AO75792 299 aaKnown RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 CCR1P32246 355 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 ACVRL1P37023 503 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 FOXA1P55317 472 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 PDAP1Q13442 181 aaKnown RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 AMIGO2Q86SJ2 522 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 SERINC5Q86VE9 423 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 METTL23Q86XA0 190 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 PQLC1Q8N2U9 271 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 CPSF7Q8N684 471 aaKnown RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 C2orf69Q8N8R5 385 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 OR13C4Q8NGS5 318 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 BLOC1S5Q8TDH9 187 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 ZBTB26Q9HCK0 441 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 GMIPQ9P107 970 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 STK39Q9UEW8 545 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 M0QZQ0 153 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 FBP2O00757 339 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 MUSKO15146 869 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 TSPAN3O60637 253 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 SUPT7LO94864 414 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 PEX11BO96011 259 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 AKR1A1P14550 325 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 CHRM3P20309 590 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 GSTT1P30711 240 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 SEMA3AQ14563 771 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 UGP2Q16851 508 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 AFMIDQ63HM1 303 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 POTEHQ6S545 545 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 SCML4Q8N228 414 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 ICA1LQ8NDH6 482 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 RP9Q8TA86 221 aaKnown RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 NUDT8Q8WV74 236 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 TBATAQ96M53 351 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 MRPL46Q9H2W6 279 aaKnown RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 ABCC13Q9NSE7 274 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 C15orf38-AP3S2A0A0A6YYH1 394 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 NCF1BA6NI72 391 aaPredicted RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 NCF1CA8MVU1 366 aaPredicted RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 AP3B1O00203 1094 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 FGF10O15520 208 aaPredicted RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 GPR39O43194 453 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 COL6A2P12110 1019 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 NCF1P14598 390 aaPredicted RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 UGT1A6P19224 532 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 DNAJB2P25686 324 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 CYP2C18P33260 490 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 ZNF157P51786 506 aaPredicted RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 GEMP55040 296 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 BRMS1LQ5PSV4 323 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 SCIMPQ6UWF3 145 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 ARPINQ7Z6K5 226 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 SPPL2BQ8TCT7 592 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 PTERQ96BW5 349 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 DNAJC1Q96KC8 554 aaKnown RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 MTG1Q9BT17 334 aaPredicted RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 CATSPERBQ9H7T0 1116 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 ENTPD7Q9NQZ7 604 aa12.75□□□□□ -0.37
CLIC4-202ENST00000488683 UXTQ9UBK9 157 aaPredicted RBP12.75□□□□□ -0.37
CLIC4-202ENST00000488683 DNAH14Q0VDD8 3507 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 NT5C1B-RDH14C9J2C7 533 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 MMP2P08253 660 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 RGS2P41220 211 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 OR1G1P47890 313 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 GATMP50440 423 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 FKBP1BP68106 108 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 LPIN1Q14693 890 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 KDELC1Q6UW63 502 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 CUZD1Q86UP6 607 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 RTL3Q8N8U3 475 aaKnown RBP12.74□□□□□ -0.37
CLIC4-202ENST00000488683 LRTOMTQ8WZ04 291 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 SPATS2LQ9NUQ6 558 aaKnown RBP12.74□□□□□ -0.37
CLIC4-202ENST00000488683 BTRCQ9Y297 605 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 CASQ2O14958 399 aaPredicted RBP12.74□□□□□ -0.37
CLIC4-202ENST00000488683 GPR182O15218 404 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 DUSP11O75319 330 aaKnown RBP12.74□□□□□ -0.37
CLIC4-202ENST00000488683 CRTAMO95727 393 aa12.74□□□□□ -0.37
CLIC4-202ENST00000488683 ASGR1P07306 291 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms