RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 HSPA1BP0DMV9 641 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 CAPN3P20807 821 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 GNLYP22749 145 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 MYF6P23409 242 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 PSMA4P25789 261 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 GNAQP50148 359 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 PGGT1BP53609 377 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 RARSP54136 660 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 EIF3BP55884 814 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 GPS2Q13227 327 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 DCTN2Q13561 401 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 MYBPC2Q14324 1141 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 TSTQ16762 297 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 ESCO2Q56NI9 601 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 TRILQ7L0X0 811 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 CPLX4Q7Z7G2 160 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 DIS3L2Q8IYB7 885 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 ZCCHC9Q8N567 271 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 TDRD7Q8NHU6 1098 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 KCNG4Q8TDN1 519 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 OIT3Q8WWZ8 545 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 NR1H4Q96RI1 486 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 MXRA8Q9BRK3 442 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 MSTO1Q9BUK6 570 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 DCLK3Q9C098 648 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 BPIFA1Q9NP55 256 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 RRAGDQ9NQL2 400 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 CYSLTR2Q9NS75 346 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 TMEM51Q9NW97 253 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 IL36RNQ9UBH0 155 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 AASSQ9UDR5 926 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 ISY1Q9ULR0 285 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 NAP1L2Q9ULW6 460 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 A4GNTQ9UNA3 340 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 A3GALT2U3KPV4 340 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 SMG6Q86US8 1419 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 TDRD9Q8NDG6 1382 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 LRRC53A6NM62 1247 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 INAFM1C9JVW0 142 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 LDLRAD4O15165 306 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 MT-CYBP00156 380 aaPredicted RBP4□□□□□ -1.77
ECHDC1-217ENST00000488087 SPARCP09486 303 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 NAGAP17050 411 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 CPOXP36551 454 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 RFX5P48382 616 aaPredicted RBP4□□□□□ -1.77
ECHDC1-217ENST00000488087 CXCR3P49682 368 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 CLNS1AP54105 237 aaKnown RBP4□□□□□ -1.77
ECHDC1-217ENST00000488087 HNF4GQ14541 408 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 RNPS1Q15287 305 aaKnown RBP4□□□□□ -1.77
ECHDC1-217ENST00000488087 GSTA3Q16772 222 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 SOWAHAQ2M3V2 549 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 TCTN1Q2MV58 587 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 CCDC184Q52MB2 194 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 TAF3Q5VWG9 929 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 TXNDC8Q6A555 127 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 MZT2BQ6NZ67 158 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 TBC1D1Q86TI0 1168 aaPredicted RBP4□□□□□ -1.77
ECHDC1-217ENST00000488087 SFTPA2Q8IWL1 248 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 DHX40Q8IX18 779 aaKnown RBP4□□□□□ -1.77
ECHDC1-217ENST00000488087 CCDC105Q8IYK2 499 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 PRKRIP1Q9H875 184 aaPredicted RBP4□□□□□ -1.77
ECHDC1-217ENST00000488087 SMYD2Q9NRG4 433 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 PLK2Q9NYY3 685 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 ORC3Q9UBD5 711 aaPredicted RBP4□□□□□ -1.77
ECHDC1-217ENST00000488087 SWAP70Q9UH65 585 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 FBXO2Q9UK22 296 aaPredicted RBP4□□□□□ -1.77
ECHDC1-217ENST00000488087 MYO6Q9UM54 1294 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 PAM16Q9Y3D7 125 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 RAI2Q9Y5P3 530 aa4□□□□□ -1.77
ECHDC1-217ENST00000488087 BAZ1BQ9UIG0 1483 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 KDM3AQ9Y4C1 1321 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 A0A0U1RQF3 1178 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 EIF3CLB5ME19 914 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 NPIPB11E5RHQ5 1161 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 SEC31AO94979 1220 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 CCNDBP1O95273 360 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 TFP02787 698 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 ETFAP13804 333 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 HOXD3P31249 432 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 RPL3P39023 403 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 GABRB2P47870 512 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 NUDT6P53370 316 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 ST3GAL1Q11201 340 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 GRIK3Q13003 919 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 TBCEQ15813 527 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 TMTC3Q6ZXV5 915 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 NOXA1Q86UR1 476 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 PELI3Q8N2H9 469 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 OR14A16Q8NHC5 309 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 ETNPPLQ8TBG4 499 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 TRIB2Q92519 343 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 SMARCE1Q969G3 411 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 FBXL8Q96CD0 374 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 TIGD1Q96MW7 591 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 PIP5K1AQ99755 562 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 TREX2Q9BQ50 279 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 RANBP17Q9H2T7 1088 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 EBF3Q9H4W6 596 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 CISD1Q9NZ45 108 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 OR6C3Q9NZP0 311 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms