RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 PPFIA2O75334 1257 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 ADAP00813 363 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 EIF2S1P05198 315 aaKnown RBP4.25□□□□□ -1.73
PTCD3-216ENST00000487043 ACSL1P33121 698 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 SKIV2L2P42285 1042 aaKnown RBP4.25□□□□□ -1.73
PTCD3-216ENST00000487043 NANOS3P60323 173 aaKnown RBP4.25□□□□□ -1.73
PTCD3-216ENST00000487043 OLR1P78380 273 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 POU5F1Q01860 360 aaKnown RBP4.25□□□□□ -1.73
PTCD3-216ENST00000487043 GOLGA8DPQ0D2H9 430 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 BECN1Q14457 450 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 KRT24Q2M2I5 525 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 C10orf76Q5T2E6 689 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 ARMC3Q5W041 872 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 CEP85Q6P2H3 762 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 KLHL35Q6PF15 583 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 ZNF790Q6PG37 636 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 CYP20A1Q6UW02 462 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 IL20RBQ6UXL0 311 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 SLC46A3Q7Z3Q1 461 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 TFAP2DQ7Z6R9 452 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 NEK8Q86SG6 692 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 ZNF575Q86XF7 245 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 DNAJC10Q8IXB1 793 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 CCDC105Q8IYK2 499 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 TMEM217Q8N7C4 229 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 C11orf65Q8NCR3 313 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 KAT6AQ92794 2004 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 FRAT1Q92837 279 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-216ENST00000487043 ARHGEF2Q92974 986 aaKnown RBP4.25□□□□□ -1.73
PTCD3-216ENST00000487043 PDLIM2Q96JY6 352 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 WDFY2Q96P53 400 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 YME1L1Q96TA2 773 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 AP1M1Q9BXS5 423 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 KAT14Q9H8E8 782 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 TXNRD2Q9NNW7 524 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 ENTPD7Q9NQZ7 604 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 C20orf141Q9NUB4 165 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 FOXJ2Q9P0K8 574 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 KIAA1456Q9P272 454 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 SLCO3A1Q9UIG8 710 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 ICKQ9UPZ9 632 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 SNX8Q9Y5X2 465 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 VIRMAQ69YN4 1812 aaKnown RBP4.25□□□□□ -1.73
PTCD3-216ENST00000487043 COL4A3Q01955 1670 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 SIPA1L3O60292 1781 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-216ENST00000487043 KDM3BQ7LBC6 1761 aa4.25□□□□□ -1.73
PTCD3-216ENST00000487043 MRC1P22897 1456 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 SHANK3Q9BYB0 1731 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.24□□□□□ -1.73
PTCD3-216ENST00000487043 WNK3Q9BYP7 1800 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 TARSL2A2RTX5 802 aaKnown RBP4.24□□□□□ -1.73
PTCD3-216ENST00000487043 MYO1GB0I1T2 1018 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 EIF3CLB5ME19 914 aaKnown RBP4.24□□□□□ -1.73
PTCD3-216ENST00000487043 BTBD19C9JJ37 291 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 RRHO14718 337 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 BEST1O76090 585 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 SEC31AO94979 1220 aaKnown RBP4.24□□□□□ -1.73
PTCD3-216ENST00000487043 IL1AP01583 271 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 HLA-DQA2P01906 255 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 ST6GAL1P15907 406 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 POU1F1P28069 291 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 GCH1P30793 250 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 TTKP33981 857 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 CYP2J2P51589 502 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 IFI35P80217 286 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-216ENST00000487043 RHAGQ02094 409 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 CYP4A11Q02928 519 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 MTA1Q13330 715 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 SLC39A6Q13433 755 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 FRG1Q14331 258 aaKnown RBP4.24□□□□□ -1.73
PTCD3-216ENST00000487043 ZNF169Q14929 603 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-216ENST00000487043 TAF11Q15544 211 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 GSTA3Q16772 222 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 FAM133BQ5BKY9 247 aaKnown RBP4.24□□□□□ -1.73
PTCD3-216ENST00000487043 C20orf194Q5TEA3 1177 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 FAM171A1Q5VUB5 890 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 NCEH1Q6PIU2 408 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 ZNF474Q6S9Z5 364 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-216ENST00000487043 PRSS45Q7RTY3 260 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 GPAT4Q86UL3 456 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 FAM160B2Q86V87 743 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 UEVLDQ8IX04 471 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 TTC5Q8N0Z6 440 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 TMEM116Q8NCL8 245 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 EXOC6Q8TAG9 804 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 PIGKQ92643 395 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 ZG16BQ96DA0 208 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 CMTM3Q96MX0 182 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 ASB2Q96Q27 587 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 IFT27Q9BW83 186 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 API5Q9BZZ5 524 aaKnown RBP4.24□□□□□ -1.73
PTCD3-216ENST00000487043 CXorf56Q9H5V9 222 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 IL17RBQ9NRM6 502 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 NFKBIL1Q9UBC1 381 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-216ENST00000487043 CTNNAL1Q9UBT7 734 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 SLC8A2Q9UPR5 921 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 TNFSF13BQ9Y275 285 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 CAPN7Q9Y6W3 813 aa4.24□□□□□ -1.73
PTCD3-216ENST00000487043 PTPRCP08575 1304 aa4.23□□□□□ -1.73
PTCD3-216ENST00000487043 KIF16BQ96L93 1317 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms