RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ALKBH5Q6P6C2 394 aaKnown RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 RFWD3Q6PCD5 774 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 DCUN1D2Q6PH85 259 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 DBX2Q6ZNG2 339 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 GK5Q6ZS86 529 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 LPCAT2Q7L5N7 544 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 TMC6Q7Z403 805 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 IQCHQ86VS3 1027 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 TSPYL5Q86VY4 417 aaPredicted RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 TMPRSS6Q8IU80 811 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 RHOT2Q8IXI1 618 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 LGI2Q8N0V4 545 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 SH2D3CQ8N5H7 860 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 PCDH20Q8N6Y1 951 aaKnown RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 NAT16Q8N8M0 369 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 RTL3Q8N8U3 475 aaKnown RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 TTC8Q8TAM2 541 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 FAM172AQ8WUF8 416 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 PRCCQ92733 491 aaPredicted RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 NKD1Q969G9 470 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 RAB7BQ96AH8 199 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 SIPA1Q96FS4 1042 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 CFAP57Q96MR6 1250 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 C11orf70Q9BRQ4 267 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 RTKNQ9BST9 563 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 CPEB1Q9BZB8 566 aaKnown RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 CIPCQ9C0C6 399 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 XPO4Q9C0E2 1151 aaKnown RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 MKRN2Q9H000 416 aaKnown RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 CATSPERBQ9H7T0 1116 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 ZDHHC4Q9NPG8 344 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 LUC7LQ9NQ29 371 aaKnown RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 PRSS16Q9NQE7 514 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 ABHD10Q9NUJ1 306 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 C2orf42Q9NWW7 574 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 IFNKQ9P0W0 207 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 ARHGAP20Q9P2F6 1191 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 IP6K2Q9UHH9 426 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 AMACRQ9UHK6 382 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 XPO7Q9UIA9 1087 aaKnown RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 PILRBQ9UKJ0 227 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 FZD10Q9ULW2 581 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 ERVW-1Q9UQF0 538 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 DMTF1Q9Y222 760 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 PCDHGB2Q9Y5G2 931 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 RAD54BQ9Y620 910 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 R4GN57 208 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 DNAH14Q0VDD8 3507 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 FRYLO94915 3013 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 FAM186AA6NE01 2351 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 DCHS1Q96JQ0 3298 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 A0A087X0T9 212 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 A0A1W2PQ67 120 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 MYO1FO00160 1098 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 SLC30A4O14863 429 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 TRIM24O15164 1050 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 YKT6O15498 198 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 TSPAN3O60637 253 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 RAMP2O60895 175 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 MFAP3LO75121 409 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 LRCH4O75427 683 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 GSRP00390 522 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 CALCAP01258 141 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 EPHX1P07099 455 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 HMBSP08397 361 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 PLEKP08567 350 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-213ENST00000480102 SERPINF2P08697 491 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 H2AFZP0C0S5 128 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 FAM228BP0C875 321 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 GNSP15586 552 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 GOT1P17174 413 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 PRKCHP24723 683 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 CASP14P31944 242 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 HSPA9P38646 679 aaKnown RBP4.99□□□□□ -1.61
PTCD3-213ENST00000480102 MPLP40238 635 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 SERPINH1P50454 418 aaKnown RBP4.99□□□□□ -1.61
PTCD3-213ENST00000480102 SGSHP51688 502 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 RPS14P62263 151 aaKnown RBP4.99□□□□□ -1.61
PTCD3-213ENST00000480102 RPL7AP62424 266 aaKnown RBP4.99□□□□□ -1.61
PTCD3-213ENST00000480102 GNA12Q03113 381 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 KDSRQ06136 332 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 NME3Q13232 169 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 DUOXA1Q1HG43 343 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 RNF219Q5W0B1 726 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-213ENST00000480102 LYSMD4Q5XG99 296 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 ANO7Q6IWH7 933 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 TSSK4Q6SA08 328 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 IL27RAQ6UWB1 636 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 CYP4V2Q6ZWL3 525 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-213ENST00000480102 H2AFVQ71UI9 128 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 CEP68Q76N32 757 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 NLRC3Q7RTR2 1065 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-213ENST00000480102 TRIM69Q86WT6 500 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 FAM131BQ86XD5 332 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 ZSWIM9Q86XI8 627 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 CREG2Q8IUH2 290 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 ARFGAP1Q8N6T3 406 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 JOSD2Q8TAC2 188 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 WFDC5Q8TCV5 224 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms