RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 UNC13CQ8NB66 2214 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 COL6A6A6NMZ7 2263 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 A0A1W2PNU3 283 aaPredicted RBP6.73□□□□□ -1.33
FN1-220ENST00000480024 TSPAN11A1L157 253 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ARHGAP42A6NI28 874 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 LRRC10BA6NIK2 292 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 LMO7DNF2Z398 122 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 TOR1BO14657 336 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 TPP1O14773 563 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 YY2O15391 372 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 DAPK3O43293 454 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 PRPSAP2O60256 369 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 LZTS3O60299 673 aaPredicted RBP6.73□□□□□ -1.33
FN1-220ENST00000480024 BUB1BO60566 1050 aaPredicted RBP6.73□□□□□ -1.33
FN1-220ENST00000480024 PALMO75781 387 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 RASGRP1O95267 797 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 MBD3O95983 291 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ERCC2P18074 760 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 HTR1BP28222 390 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 SERPINA4P29622 427 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 HTR7P34969 479 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 LSSP48449 732 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 LIG3P49916 1009 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 SUOXP51687 545 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 HK3P52790 923 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 PDX1P52945 283 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 YPEL5P62699 121 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 SPIDRQ14159 915 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 INPP5AQ14642 412 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 GRM3Q14832 879 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 NFATC4Q14934 902 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 UGP2Q16851 508 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 TMEM52BQ4KMG9 183 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ANO6Q4KMQ2 910 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 BROXQ5VW32 411 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 KCTD16Q68DU8 428 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 PLEKHA7Q6IQ23 1121 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ESRP1Q6NXG1 681 aaKnown RBP6.73□□□□□ -1.33
FN1-220ENST00000480024 BRAT1Q6PJG6 821 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ENPP7Q6UWV6 458 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ARHGAP36Q6ZRI8 547 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 RFX8Q6ZV50 586 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 IRF2BP2Q7Z5L9 587 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ARHGAP12Q8IWW6 846 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 LSMEM2Q8N112 164 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ARFGAP1Q8N6T3 406 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ARL10Q8N8L6 244 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 PLA2G15Q8NCC3 412 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 TSEN2Q8NCE0 465 aaKnown RBP6.73□□□□□ -1.33
FN1-220ENST00000480024 KCNE4Q8WWG9 221 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 SLC39A7Q92504 469 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 NAT6Q93015 286 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 TSACCQ96A04 125 aaPredicted RBP6.73□□□□□ -1.33
FN1-220ENST00000480024 CCDC74AQ96AQ1 378 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ZNF653Q96CK0 615 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 PDXPQ96GD0 296 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 HIC2Q96JB3 615 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 VCPIP1Q96JH7 1222 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 TBATAQ96M53 351 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ZNF578Q96N58 590 aaPredicted RBP6.73□□□□□ -1.33
FN1-220ENST00000480024 TUBGCP5Q96RT8 1024 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 CCDC3Q9BQI4 270 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.73□□□□□ -1.33
FN1-220ENST00000480024 SLC39A8Q9C0K1 460 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 SUV39H2Q9H5I1 410 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 HAUS4Q9H6D7 363 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ATP13A3Q9H7F0 1226 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ASCL3Q9NQ33 180 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 THSD1Q9NS62 852 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 PARVAQ9NVD7 372 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 MYO1AQ9UBC5 1043 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 GULP1Q9UBP9 304 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 CNOT8Q9UFF9 292 aaKnown RBP6.73□□□□□ -1.33
FN1-220ENST00000480024 PADI4Q9UM07 663 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 ENTPD2Q9Y5L3 495 aa6.73□□□□□ -1.33
FN1-220ENST00000480024 TTC24A2A3L6 582 aaPredicted RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 EIF3CLB5ME19 914 aaKnown RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 RIOK3O14730 519 aaKnown RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 ATXN7O15265 892 aaPredicted RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 KLK10O43240 276 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 LRCH4O75427 683 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 TCEA3O75764 348 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 C1QL1O75973 258 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 RNF8O76064 485 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 DXOO77932 396 aaKnown RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 RECQL5O94762 991 aaPredicted RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 RPLP0P05388 317 aaKnown RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 ALPIP09923 528 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 ELFN1P0C7U0 828 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 CTSEP14091 401 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 RBMS1P29558 406 aaKnown RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 MIPP30301 263 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 SCNN1BP51168 640 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 BLKP51451 505 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 TMPRSS3P57727 454 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 ERVPABLB-1P60509 514 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 SRP54P61011 504 aaKnown RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 BCL2L1Q07817 233 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 RALGDSQ12967 914 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 MTM1Q13496 603 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms