RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 LRRC73Q5JTD7 316 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 NAPEPLDQ6IQ20 393 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 PID1Q7Z2X4 250 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 ZNF567Q8N184 647 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 SLC35F6Q8N357 371 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 ZCCHC9Q8N567 271 aaKnown RBP10.9□□□□□ -0.66
ATG4B-219ENST00000479941 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.9□□□□□ -0.66
ATG4B-219ENST00000479941 SLC35B2Q8TB61 432 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 ASB12Q8WXK4 309 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 PBKQ96KB5 322 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 FAM118BQ9BPY3 351 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 NUSAP1Q9BXS6 441 aaKnown RBP10.9□□□□□ -0.66
ATG4B-219ENST00000479941 SLC17A9Q9BYT1 436 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 EBF2Q9HAK2 575 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 TM9SF3Q9HD45 589 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 PARD6AQ9NPB6 346 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 PCDH12Q9NPG4 1184 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 KCND1Q9NSA2 647 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 SLC6A14Q9UN76 642 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 RPL26L1Q9UNX3 145 aaKnown RBP10.9□□□□□ -0.66
ATG4B-219ENST00000479941 ZFR2Q9UPR6 939 aaKnown RBP10.9□□□□□ -0.66
ATG4B-219ENST00000479941 ITM2BQ9Y287 266 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 ZKSCAN5Q9Y2L8 839 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 PPIL1Q9Y3C6 166 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 TNRC6BQ9UPQ9 1833 aaKnown RBP10.9□□□□□ -0.66
ATG4B-219ENST00000479941 DMXL1Q9Y485 3027 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 TCRBV7S2A1N4TA0A589 114 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 PRAMEF26H0Y7S4 382 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 KCNN4O15554 427 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 CEP104O60308 925 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 MMP20O60882 483 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 FGGP02679 453 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 CFIP05156 583 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 PDHA1P08559 390 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 CYP2A6P11509 494 aaPredicted RBP10.89□□□□□ -0.67
ATG4B-219ENST00000479941 ITIH2P19823 946 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 HNRNPA2B1P22626 353 aaKnown RBP10.89□□□□□ -0.67
ATG4B-219ENST00000479941 STIP1P31948 543 aaKnown RBP10.89□□□□□ -0.67
ATG4B-219ENST00000479941 CXCR5P32302 372 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 CD68P34810 354 aaPredicted RBP10.89□□□□□ -0.67
ATG4B-219ENST00000479941 MMP12P39900 470 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 PI4KAP42356 2102 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 GRIA4P48058 902 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 EPHB1P54762 984 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 SGCGQ13326 291 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 IHHQ14623 411 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 TEAD4Q15561 434 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 SEL1L3Q68CR1 1132 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 ITPRIPL1Q6GPH6 555 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 PRR23CQ6ZRP0 262 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 DPPA4Q7L190 304 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 C12orf50Q8NA57 414 aaPredicted RBP10.89□□□□□ -0.67
ATG4B-219ENST00000479941 PIH1D2Q8WWB5 315 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 SKA1Q96BD8 255 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 TADA1Q96BN2 335 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 SCRN2Q96FV2 425 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 SERAC1Q96JX3 654 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 LENG8Q96PV6 779 aaPredicted RBP10.89□□□□□ -0.67
ATG4B-219ENST00000479941 FCRL5Q96RD9 977 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 MCCC1Q96RQ3 725 aaPredicted RBP10.89□□□□□ -0.67
ATG4B-219ENST00000479941 RBM15Q96T37 977 aaKnown RBP eCLIP10.89□□□□□ -0.67
ATG4B-219ENST00000479941 C1QTNF2Q9BXJ5 285 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 SMOC1Q9H4F8 434 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 C10orf88Q9H8K7 445 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 USP29Q9HBJ7 922 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 PCDH9Q9HC56 1237 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 CAPN10Q9HC96 672 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 GGT7Q9UJ14 662 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 R3HDM2Q9Y2K5 976 aaKnown RBP10.89□□□□□ -0.67
ATG4B-219ENST00000479941 RALGAPA1Q6GYQ0 2036 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 KNL1Q8NG31 2342 aa10.89□□□□□ -0.67
ATG4B-219ENST00000479941 DNAH14Q0VDD8 3507 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 ANKRD36A6QL64 1941 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 A0A0J9YYE9 177 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 C5orf60A6NFR6 353 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 IGLON5A6NGN9 336 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 PATE3B3GLJ2 98 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 SLC31A1O15431 190 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 LIASO43766 372 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 MAGEC1O60732 1142 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 OPHN1O60890 802 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 TM7SF2O76062 418 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 PAK4O96013 591 aaPredicted RBP10.88□□□□□ -0.67
ATG4B-219ENST00000479941 PRLP01236 227 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 TRBC1P01850 177 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 ATP1A1P05023 1023 aaKnown RBP10.88□□□□□ -0.67
ATG4B-219ENST00000479941 PRKCGP05129 697 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 SYPP08247 313 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 NFKB1P19838 968 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 CD38P28907 300 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 HOXD11P31277 338 aaPredicted RBP10.88□□□□□ -0.67
ATG4B-219ENST00000479941 AKT2P31751 481 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 CSNK1EP49674 416 aaKnown RBP10.88□□□□□ -0.67
ATG4B-219ENST00000479941 LIG3P49916 1009 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 GNG11P61952 73 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 IRX4P78413 519 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 LMNB2Q03252 620 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 CDK18Q07002 472 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 OVGP1Q12889 678 aa10.88□□□□□ -0.67
ATG4B-219ENST00000479941 STAT4Q14765 748 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms