RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 RNF183Q96D59 192 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 PGAP3Q96FM1 320 aaPredicted RBP5.33□□□□□ -1.56
UPF3B-203ENST00000478840 SLITRK1Q96PX8 696 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 GCNAQ96QF7 691 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 ABHD1Q96SE0 405 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 MXRA8Q9BRK3 442 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 SRSF8Q9BRL6 282 aaKnown RBP5.33□□□□□ -1.56
UPF3B-203ENST00000478840 ZNF747Q9BV97 191 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 C1QTNF5Q9BXJ0 243 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 C1QTNF1Q9BXJ1 281 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 ZNF341Q9BYN7 854 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 SIL1Q9H173 461 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 RSPH9Q9H1X1 276 aaPredicted RBP5.33□□□□□ -1.56
UPF3B-203ENST00000478840 KLK15Q9H2R5 256 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 SPAG4Q9NPE6 437 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 PNRC2Q9NPJ4 139 aaKnown RBP5.33□□□□□ -1.56
UPF3B-203ENST00000478840 SETD4Q9NVD3 440 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 EXO1Q9UQ84 846 aaKnown RBP5.33□□□□□ -1.56
UPF3B-203ENST00000478840 LAMP3Q9UQV4 416 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 CCL27Q9Y4X3 112 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 LSM4Q9Y4Z0 139 aaKnown RBP5.33□□□□□ -1.56
UPF3B-203ENST00000478840 KAT6AQ92794 2004 aa5.33□□□□□ -1.56
UPF3B-203ENST00000478840 NCANO14594 1321 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 LOC100509620A0A075B734 347 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 KIR2DS5A0A0G2JLQ3 304 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 DPPA5A6NC42 116 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 DDTLA6NHG4 134 aaPredicted RBP5.32□□□□□ -1.56
UPF3B-203ENST00000478840 NPIPB8E9PQR5 432 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 SMIM22K7EJ46 135 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 KIR2DS3K7RE56 304 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 FOXN1O15353 648 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 SLC25A17O43808 307 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 MITFO75030 526 aaPredicted RBP5.32□□□□□ -1.56
UPF3B-203ENST00000478840 DAB1O75553 588 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 NKX2-2O95096 273 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 QDPRP09417 244 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 CXCR3P49682 368 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 MRPS5P82675 430 aaKnown RBP5.32□□□□□ -1.56
UPF3B-203ENST00000478840 CFHR1Q03591 330 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 IKQ13123 557 aaPredicted RBP5.32□□□□□ -1.56
UPF3B-203ENST00000478840 SCARB2Q14108 478 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 ZSCAN23Q3MJ62 389 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 ALG10Q5BKT4 473 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 SGO1Q5FBB7 561 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 ALG10BQ5I7T1 473 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 C1orf141Q5JVX7 400 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 ZNF362Q5T0B9 420 aaPredicted RBP5.32□□□□□ -1.56
UPF3B-203ENST00000478840 MEX3CQ5U5Q3 659 aaKnown RBP5.32□□□□□ -1.56
UPF3B-203ENST00000478840 PLEKHA7Q6IQ23 1121 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 CRELD2Q6UXH1 353 aaPredicted RBP5.32□□□□□ -1.56
UPF3B-203ENST00000478840 TSPAN33Q86UF1 283 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 KBTBD6Q86V97 674 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 SLC25A41Q8N5S1 370 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 DPP10Q8N608 796 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 GJC3Q8NFK1 279 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 RASSF8Q8NHQ8 419 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 DUSP19Q8WTR2 217 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 IGFBPL1Q8WX77 278 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 FBXL8Q96CD0 374 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 ELMOD3Q96FG2 381 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 SIN3AQ96ST3 1273 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 ADPGKQ9BRR6 497 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 NUF2Q9BZD4 464 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 TKTL2Q9H0I9 626 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 OSGEPL1Q9H4B0 414 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 PLK3Q9H4B4 646 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 MAGEE1Q9HCI5 957 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 PAPOLBQ9NRJ5 636 aaKnown RBP5.32□□□□□ -1.56
UPF3B-203ENST00000478840 SEMA4GQ9NTN9 838 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 ASB6Q9NWX5 421 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 TAB2Q9NYJ8 693 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 C5AR2Q9P296 337 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 CPSF2Q9P2I0 782 aaKnown RBP5.32□□□□□ -1.56
UPF3B-203ENST00000478840 NDRG3Q9UGV2 375 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 TLK1Q9UKI8 766 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 PTRH2Q9Y3E5 179 aaKnown RBP5.32□□□□□ -1.56
UPF3B-203ENST00000478840 A3GALT2U3KPV4 340 aa5.32□□□□□ -1.56
UPF3B-203ENST00000478840 A0A1W2PR77 199 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 RHODO00212 210 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 TPPPO94811 219 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 GCP02774 474 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 MYZAPP0CAP1 466 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 ACTN1P12814 892 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 SCG2P13521 617 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 PIK3CAP42336 1068 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 STAT2P52630 851 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 GALCP54803 685 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 UBXN2AP68543 259 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 TFF2Q03403 129 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 ACSM2AQ08AH3 577 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 KLF10Q13118 480 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 RUNX2Q13950 521 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 C9orf152Q5JTZ5 239 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 ACSM2BQ68CK6 577 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 FCRLBQ6BAA4 426 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 LRRC8EQ6NSJ5 796 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 QSOX2Q6ZRP7 698 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 CLEC17AQ6ZS10 378 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 FAM57BQ71RH2 274 aa5.31□□□□□ -1.56
UPF3B-203ENST00000478840 DENND6AQ8IWF6 608 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms