RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SNX25Q9H3E2 840 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 GAREM1Q9H706 876 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 PRDM16Q9HAZ2 1276 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 CSNK1G1Q9HCP0 422 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 SLC39A2Q9NP94 309 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 ITM2CQ9NQX7 267 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 AGPAT3Q9NRZ7 376 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 THAP10Q9P2Z0 257 aaPredicted RBP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 EIF2B4Q9UI10 523 aaKnown RBP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 EXOC7Q9UPT5 735 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 DMRT1Q9Y5R6 373 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 STON1Q9Y6Q2 735 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 UNC13CQ8NB66 2214 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 DOCK4Q8N1I0 1966 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 SCN8AQ9UQD0 1980 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 A0A087WV48 116 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 A0A1B0GTW7 788 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 LRRIQ3A6PVS8 624 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 C10orf142B7Z368 130 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 BCAT2O15382 392 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 ARHGAP6O43182 974 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 TLX3O43711 291 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 ZNF217O75362 1048 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 STC2O76061 302 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 BMP15O95972 392 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 PENKP01210 267 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 IGLV3-19P01714 112 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 C4BPAP04003 597 aaKnown RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 FAM163BP0C2L3 166 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 ZNF883P0CG24 379 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 ZNF888P0CJ79 500 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 HLA-EP13747 358 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 TNNI1P19237 187 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 MAKP20794 623 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 CSNK1EP49674 416 aaKnown RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 MFAP3P55082 362 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 MAP3K7CLP57077 242 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 CEBPZQ03701 1054 aaKnown RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 ALCAMQ13740 583 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 HNRNPDQ14103 355 aaKnown RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 ZNF234Q14588 700 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 KIF19Q2TAC6 998 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 SPOPLQ6IQ16 392 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 ARHGAP36Q6ZRI8 547 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 CLEC20AQ6ZU45 233 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 USP30Q70CQ3 517 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 TRMT11Q7Z4G4 463 aaKnown RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 BRAPQ7Z569 592 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 RABEPKQ7Z6M1 372 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 MRGPRGQ86SM5 289 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 ADGRE4PQ86SQ3 457 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 TMPRSS6Q8IU80 811 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 NELFCDQ8IXH7 590 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 PDILTQ8N807 584 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 ZNF366Q8N895 744 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 IL17DQ8TAD2 202 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 SLC2A14Q8TDB8 520 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 SETD7Q8WTS6 366 aaKnown RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 FBXW5Q969U6 566 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 USP28Q96RU2 1077 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 ZDHHC5Q9C0B5 715 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 FAM124BQ9H5Z6 455 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 C6orf106Q9H6K1 298 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 CAAP1Q9H8G2 361 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 MMRN2Q9H8L6 949 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 IPPKQ9H8X2 491 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 EBF2Q9HAK2 575 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 APOBEC3GQ9HC16 384 aaKnown RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 DMAP1Q9NPF5 467 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 TM7SF3Q9NS93 570 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 FAM49BQ9NUQ9 324 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 GALNT8Q9NY28 637 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 EHD2Q9NZN4 543 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 SRPK3Q9UPE1 567 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 SMC3Q9UQE7 1217 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 SCML2Q9UQR0 700 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 APOBEC2Q9Y235 224 aaKnown RBP4.79□□□□□ -1.64
CKS1B-207ENST00000477676 SLC27A6Q9Y2P4 619 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 SH3BP1Q9Y3L3 701 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 NFE2L3Q9Y4A8 694 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 RAI2Q9Y5P3 530 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 CENPEQ02224 2701 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 LRRK1Q38SD2 2015 aa4.79□□□□□ -1.64
CKS1B-207ENST00000477676 SPTAN1Q13813 2472 aaKnown RBP4.78□□□□□ -1.64
CKS1B-207ENST00000477676 ARHGEF17Q96PE2 2063 aaPredicted RBP4.78□□□□□ -1.64
CKS1B-207ENST00000477676 ANKRD62A6NC57 917 aa4.78□□□□□ -1.64
CKS1B-207ENST00000477676 PLK4O00444 970 aa4.78□□□□□ -1.64
CKS1B-207ENST00000477676 WNT9AO14904 365 aa4.78□□□□□ -1.64
CKS1B-207ENST00000477676 KIAA0391O15091 583 aaKnown RBP4.78□□□□□ -1.64
CKS1B-207ENST00000477676 EIF3DO15371 548 aaKnown RBP eCLIP4.78□□□□□ -1.64
CKS1B-207ENST00000477676 NDUFS2O75306 463 aa4.78□□□□□ -1.64
CKS1B-207ENST00000477676 IL18BPO95998 194 aa4.78□□□□□ -1.64
CKS1B-207ENST00000477676 ACRV1P26436 265 aa4.78□□□□□ -1.64
CKS1B-207ENST00000477676 ACSL1P33121 698 aa4.78□□□□□ -1.64
CKS1B-207ENST00000477676 STAT6P42226 847 aa4.78□□□□□ -1.64
CKS1B-207ENST00000477676 MATKP42679 507 aa4.78□□□□□ -1.64
CKS1B-207ENST00000477676 KIF11P52732 1056 aa4.78□□□□□ -1.64
CKS1B-207ENST00000477676 NDST1P52848 882 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms