RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TTLL3Q9Y4R7 772 aa24.19■■□□□ 1.46
CPNE1-223ENST00000475146 C3orf70A6NLC5 250 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-223ENST00000475146 APOL1O14791 398 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 HYAL3O43820 417 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-223ENST00000475146 LZTS3O60299 673 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-223ENST00000475146 TRIM16O95361 564 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 SPINK2P20155 84 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 CCNCP24863 283 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 LIG3P49916 1009 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 SLC10A2Q12908 348 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-223ENST00000475146 PDE1CQ14123 709 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-223ENST00000475146 ZNF542PQ5EBM4 170 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 RALGPS1Q5JS13 557 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 VSIG1Q86XK7 387 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 RFX6Q8HWS3 928 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 TEX26Q8N6G2 289 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 PNPLA1Q8N8W4 532 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 CCNYQ8ND76 341 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 MAML1Q92585 1016 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 CENPTQ96BT3 561 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 TSGA13Q96PP4 275 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 GPR27Q9NS67 375 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 HAUS2Q9NVX0 235 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 DNAJC28Q9NX36 388 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 DTLQ9NZJ0 730 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 HEY1Q9Y5J3 304 aa24.18■■□□□ 1.46
CPNE1-223ENST00000475146 A0A0A6YYK5 440 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-223ENST00000475146 MATN3O15232 486 aa24.17■■□□□ 1.46
CPNE1-223ENST00000475146 TNFSF14O43557 240 aa24.17■■□□□ 1.46
CPNE1-223ENST00000475146 CPP00450 1065 aa24.17■■□□□ 1.46
CPNE1-223ENST00000475146 ATXN1LP0C7T5 689 aaKnown RBP24.17■■□□□ 1.46
CPNE1-223ENST00000475146 PFN3P60673 137 aa24.17■■□□□ 1.46
CPNE1-223ENST00000475146 TRAF2Q12933 501 aa24.17■■□□□ 1.46
CPNE1-223ENST00000475146 IRF4Q15306 451 aa24.17■■□□□ 1.46
CPNE1-223ENST00000475146 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.17■■□□□ 1.46
CPNE1-223ENST00000475146 PLD5Q8N7P1 536 aa24.17■■□□□ 1.46
CPNE1-223ENST00000475146 TP53I13Q8NBR0 393 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-223ENST00000475146 SPC24Q8NBT2 197 aa24.17■■□□□ 1.46
CPNE1-223ENST00000475146 HDAC11Q96DB2 347 aa24.17■■□□□ 1.46
CPNE1-223ENST00000475146 SEMA3CQ99985 751 aa24.17■■□□□ 1.46
CPNE1-223ENST00000475146 POLR1EQ9GZS1 481 aaKnown RBP24.17■■□□□ 1.46
CPNE1-223ENST00000475146 MBNL1Q9NR56 388 aaKnown RBP24.17■■□□□ 1.46
CPNE1-223ENST00000475146 RBM22Q9NW64 420 aaKnown RBP eCLIP24.17■■□□□ 1.46
CPNE1-223ENST00000475146 ALG6Q9Y672 507 aa24.17■■□□□ 1.46
CPNE1-223ENST00000475146 A0A1W2PQ67 120 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 HTRA2O43464 458 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-223ENST00000475146 PSTPIP1O43586 416 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 THOP1P52888 689 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 DYNLT1P63172 113 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 RALGDSQ12967 914 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 FZD2Q14332 565 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 LRRC14Q15048 493 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 CCDC157Q569K6 752 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 SLC9A4Q6AI14 798 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 RAD9BQ6WBX8 426 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 DPPA4Q7L190 304 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 SLCO6A1Q86UG4 719 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 PARGQ86W56 976 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 CCDC13Q8IYE1 715 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 CHCHD4Q8N4Q1 142 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 CNDP2Q96KP4 475 aaKnown RBP24.16■■□□□ 1.46
CPNE1-223ENST00000475146 SCNM1Q9BWG6 230 aa24.16■■□□□ 1.46
CPNE1-223ENST00000475146 SPTY2D1-AS1A0A0U1RR47 76 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 A8MX80 341 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 LDOC1O95751 146 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-223ENST00000475146 ELFN1P0C7U0 828 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 CCNB1P14635 433 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 ZFXP17010 805 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-223ENST00000475146 CDC25BP30305 580 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 ARMC12Q5T9G4 340 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 C11orf63Q6NUN7 778 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 MFSD7Q6UXD7 560 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 KANSL1Q7Z3B3 1105 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 FATE1Q969F0 183 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 IFT43Q96FT9 208 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 CNTNAP3BQ96NU0 1288 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 BAG1Q99933 345 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-223ENST00000475146 CNTNAP3Q9BZ76 1288 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 B4GALT6Q9UBX8 382 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 WASF3Q9UPY6 502 aa24.15■■□□□ 1.46
CPNE1-223ENST00000475146 PIAS2O75928 621 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 PCCBP05166 539 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 DGKAP23743 735 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 NFKBIAP25963 317 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 NAP1L1P55209 391 aaKnown RBP24.14■■□□□ 1.45
CPNE1-223ENST00000475146 DSC2Q02487 901 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 PTK2BQ14289 1009 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 WSCD2Q2TBF2 565 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 TPRG1LQ5T0D9 272 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 NPNTQ6UXI9 565 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 DAAM2Q86T65 1068 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 ACRBPQ8NEB7 543 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 ADAMTS14Q8WXS8 1223 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 LGMNQ99538 433 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 CAAP1Q9H8G2 361 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 UCKL1Q9NWZ5 548 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 TOR4AQ9NXH8 423 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 IMPACTQ9P2X3 320 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 RAI2Q9Y5P3 530 aa24.14■■□□□ 1.45
CPNE1-223ENST00000475146 CFAP69A5D8W1 941 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms