RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 NPFFR1Q9GZQ6 430 aa5.79□□□□□ -1.48
CCDC39-202ENST00000471307 CXorf56Q9H5V9 222 aa5.79□□□□□ -1.48
CCDC39-202ENST00000471307 PANK3Q9H999 370 aa5.79□□□□□ -1.48
CCDC39-202ENST00000471307 TERF2IPQ9NYB0 399 aa5.79□□□□□ -1.48
CCDC39-202ENST00000471307 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.79□□□□□ -1.48
CCDC39-202ENST00000471307 TULP4Q9NRJ4 1543 aa5.79□□□□□ -1.48
CCDC39-202ENST00000471307 SMTNL1A8MU46 457 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 SLC16A5O15375 505 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 ANP32CO43423 234 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 ADGRB2O60241 1585 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 CKMT1AP12532 417 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 DAOP14920 347 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 C21orf33P30042 268 aaPredicted RBP5.78□□□□□ -1.48
CCDC39-202ENST00000471307 GRK6P43250 576 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 CENPAP49450 140 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 TUBA1BP68363 451 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 POU3F1Q03052 451 aaPredicted RBP5.78□□□□□ -1.48
CCDC39-202ENST00000471307 FAM27E3Q08E93 113 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 OS9Q13438 667 aaPredicted RBP5.78□□□□□ -1.48
CCDC39-202ENST00000471307 KIF19Q2TAC6 998 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 ADCK5Q3MIX3 580 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 MYCT1Q8N699 235 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 ATOH1Q92858 354 aaPredicted RBP5.78□□□□□ -1.48
CCDC39-202ENST00000471307 RBM17Q96I25 401 aaKnown RBP5.78□□□□□ -1.48
CCDC39-202ENST00000471307 DUX5Q96PT3 197 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 CTDSP1Q9GZU7 261 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 MVB12BQ9H7P6 319 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 ZNF556Q9HAH1 456 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 WDR6Q9NNW5 1121 aaKnown RBP5.78□□□□□ -1.48
CCDC39-202ENST00000471307 ENTPD7Q9NQZ7 604 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 NLKQ9UBE8 527 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 HDAC6Q9UBN7 1215 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 SUFUQ9UMX1 484 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 KNSTRNQ9Y448 316 aa5.78□□□□□ -1.48
CCDC39-202ENST00000471307 ADGRL3Q9HAR2 1447 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-202ENST00000471307 KDM4EB2RXH2 506 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-202ENST00000471307 CHL1O00533 1208 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 HNF1BP35680 557 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 PDLIM4P50479 330 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 HYAL1Q12794 435 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 TRAF3Q13114 568 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 MYBPC2Q14324 1141 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 POSTNQ15063 836 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 GORABQ5T7V8 394 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 ARMC9Q7Z3E5 817 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 GHDCQ8N2G8 530 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 USP38Q8NB14 1042 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 AFG1LQ8WV93 481 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 TMEM170AQ8WVE7 144 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 LMLNQ96KR4 655 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 FAM167BQ9BTA0 163 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 MSTO1Q9BUK6 570 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 TTC12Q9H892 705 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-202ENST00000471307 CNPY2Q9Y2B0 182 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 GDAQ9Y2T3 454 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 TMEM94Q12767 1356 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 DOCK7Q96N67 2140 aa5.77□□□□□ -1.49
CCDC39-202ENST00000471307 TCF20Q9UGU0 1960 aaKnown RBP5.76□□□□□ -1.49
CCDC39-202ENST00000471307 ANKARQ7Z5J8 1434 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 STRCP1A6NGW2 1772 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 IGLV5-52A0A0A0MRZ9 124 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 A0A0U1RQJ8 604 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 IFITM10A6NMD0 228 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 STX16-NPEPL1H3BU86 382 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 STX16O14662 325 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 DHX16O60231 1041 aaKnown RBP5.76□□□□□ -1.49
CCDC39-202ENST00000471307 ZBTB11O95625 1053 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-202ENST00000471307 CTPS1P17812 591 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 COMPP49747 757 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-202ENST00000471307 MXI1P50539 228 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 EFR3AQ14156 821 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 CTTNQ14247 550 aaKnown RBP5.76□□□□□ -1.49
CCDC39-202ENST00000471307 ME3Q16798 604 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 PLEKHO1Q53GL0 409 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-202ENST00000471307 SH2D4BQ5SQS7 431 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 CUZD1Q86UP6 607 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 MOGAT3Q86VF5 341 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 NEXN-AS1Q8NBZ9 246 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 TMED6Q8WW62 240 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 RNF183Q96D59 192 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 RNFT2Q96EX2 444 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 DDX31Q9H8H2 851 aaKnown RBP5.76□□□□□ -1.49
CCDC39-202ENST00000471307 CLK4Q9HAZ1 481 aaKnown RBP5.76□□□□□ -1.49
CCDC39-202ENST00000471307 NOD2Q9HC29 1040 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 IFT80Q9P2H3 777 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-202ENST00000471307 RIPOR2Q9Y4F9 1068 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 MSH6P52701 1360 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 KTN1Q86UP2 1357 aaKnown RBP5.76□□□□□ -1.49
CCDC39-202ENST00000471307 ANKRD36BQ8N2N9 1353 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 NPC1L1Q9UHC9 1359 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 CDC42BPGQ6DT37 1551 aa5.76□□□□□ -1.49
CCDC39-202ENST00000471307 DCCP43146 1447 aa5.75□□□□□ -1.49
CCDC39-202ENST00000471307 PPIP5K1Q6PFW1 1433 aa5.75□□□□□ -1.49
CCDC39-202ENST00000471307 LRRC7Q96NW7 1537 aa5.75□□□□□ -1.49
CCDC39-202ENST00000471307 A0A1B0GVM2 712 aa5.75□□□□□ -1.49
CCDC39-202ENST00000471307 LINC01553A4QN01 128 aa5.75□□□□□ -1.49
CCDC39-202ENST00000471307 LDB3O75112 727 aa5.75□□□□□ -1.49
CCDC39-202ENST00000471307 ITGB8P26012 769 aa5.75□□□□□ -1.49
CCDC39-202ENST00000471307 PTPN9P43378 593 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms