RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TRIM59Q8IWR1 403 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 CACNA2D3Q8IZS8 1091 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 CLEC18CQ8NCF0 446 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 PDXPQ96GD0 296 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 NCAPGQ9BPX3 1015 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 TMEM51Q9NW97 253 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 UNC79Q9P2D8 2635 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 ZNF891A8MT65 544 aaPredicted RBP19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 BUB1O43683 1085 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 NUDT21O43809 227 aaKnown RBP19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 GNA14O95837 355 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 IGSF6O95976 241 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 OR1D5P58170 312 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 ELP6Q0PNE2 266 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 TMEM52BQ4KMG9 183 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 EFHC2Q5JST6 749 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 SPECC1LQ69YQ0 1117 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 HIST2H2BCQ6DN03 193 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 OGFOD3Q6PK18 319 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 ATCAYQ86WG3 371 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 NETO2Q8NC67 525 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 CCDC112Q8NEF3 446 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 NELFBQ8WX92 580 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 GDPD2Q9HCC8 539 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 PPARGC1AQ9UBK2 798 aaKnown RBP19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 HOOK1Q9UJC3 728 aaKnown RBP19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 CREBBPQ92793 2442 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 ANKRD36A6QL64 1941 aa19.12■□□□□ 0.65
NCKIPSD-209ENST00000470006 BICDL2A1A5D9 508 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 RHPN2P1A8MT19 583 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 CACNB4O00305 520 aaPredicted RBP19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 ZW10O43264 779 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 PRKAR1AP10644 381 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 FGF3P11487 239 aaPredicted RBP19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 CD44P16070 742 aaKnown RBP19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 UGT1A3P35503 534 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 B4GALNT1Q00973 533 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 HLTFQ14527 1009 aaKnown RBP eCLIP19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 KCTD16Q68DU8 428 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 TTI2Q6NXR4 508 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 OR1E3Q8WZA6 343 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 NT5C3BQ969T7 300 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 HMCESQ96FZ2 354 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 TTYH3Q9C0H2 523 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 CDH19Q9H159 772 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 MRPL40Q9NQ50 206 aaKnown RBP19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 NDFIP2Q9NV92 336 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 CTNND2Q9UQB3 1225 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 DGKBQ9Y6T7 804 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 ICE1Q9Y2F5 2266 aa19.11■□□□□ 0.65
NCKIPSD-209ENST00000470006 ARHGEF17Q96PE2 2063 aaPredicted RBP19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 CXorf51AA0A1B0GTR3 108 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 GOLGA8SH3BPF8 625 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 B4GAT1O43505 415 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 RAMP2O60895 175 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 TMCC1O94876 653 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 PPP1R2P41236 205 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 PPM1FP49593 454 aaPredicted RBP19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 STX17P56962 302 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 RHOAP61586 193 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 CFAP58Q5T655 872 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 ERAP2Q6P179 960 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 TRIM65Q6PJ69 517 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 OR56A4Q8NGH8 313 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 KIAA1524Q8TCG1 905 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 ART4Q93070 314 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 PMEPA1Q969W9 287 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 C18orf8Q96DM3 657 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 CCDC74BQ96LY2 380 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 CFAP57Q96MR6 1250 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 NUDT22Q9BRQ3 303 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 ZMYND15Q9H091 742 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 TMEM168Q9H0V1 697 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 MAGEH1Q9H213 219 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 SUDS3Q9H7L9 328 aaPredicted RBP19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 DKK3Q9UBP4 350 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 OR12D3Q9UGF7 316 aa19.1■□□□□ 0.65
NCKIPSD-209ENST00000470006 IGHV5-10-1A0A0J9YXX1 117 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 GOLGA6L4A6NEF3 574 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 HGSO14964 777 aaPredicted RBP19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 NKX2-8O15522 239 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 SLC9A1P19634 815 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 CSTF2P33240 577 aaKnown RBP eCLIP19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 MAPKAPK2P49137 400 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 LIG3P49916 1009 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 SUOXP51687 545 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 MAZP56270 477 aaKnown RBP19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 APBA1Q02410 837 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 MTM1Q13496 603 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 NRSN1Q8IZ57 195 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 FMR1NBQ8N0W7 255 aaPredicted RBP19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 TMEM35BQ8NCS4 154 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 CCL4L1Q8NHW4 92 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 ABHD17AQ96GS6 310 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 CYP4F12Q9HCS2 524 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 PCDH12Q9NPG4 1184 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 SLC39A1Q9NY26 324 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 APEX2Q9UBZ4 518 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 DAAM1Q9Y4D1 1078 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 ATP6V1DQ9Y5K8 247 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms