RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 CADM3Q8N126 398 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 RAB40AQ8WXH6 277 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 ELP4Q96EB1 424 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 CFAP53Q96M91 514 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 CD180Q99467 661 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 EYA3Q99504 573 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 EBF3Q9H4W6 596 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 KLHL31Q9H511 634 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 MRPL44Q9H9J2 332 aaKnown RBP4.4□□□□□ -1.71
EDEM3-205ENST00000466606 PLAC1Q9HBJ0 212 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 IFT80Q9P2H3 777 aaPredicted RBP4.4□□□□□ -1.71
EDEM3-205ENST00000466606 PTGDR2Q9Y5Y4 395 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 PLEKHG2Q9H7P9 1386 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 PLEKHG1Q9ULL1 1385 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 RIMS2Q9UQ26 1411 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.39□□□□□ -1.71
EDEM3-205ENST00000466606 C17orf102A2RUQ5 167 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 FAM90A10PA6NDY2 464 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 GAGE12JA6NER3 117 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 CHRM4P08173 479 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 HNRNPA1P09651 372 aaKnown RBP eCLIP4.39□□□□□ -1.71
EDEM3-205ENST00000466606 HSPA8P11142 646 aaKnown RBP4.39□□□□□ -1.71
EDEM3-205ENST00000466606 ARSBP15848 533 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 ARRB2P32121 409 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 GGT5P36269 586 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 THPOP40225 353 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 ENTPD1P49961 510 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 KRTAP10-11P60412 298 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 TBL3Q12788 808 aaKnown RBP4.39□□□□□ -1.71
EDEM3-205ENST00000466606 TRPC3Q13507 836 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 CAPSQ13938 189 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 ATG9BQ674R7 924 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 RETSATQ6NUM9 610 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 LURAP1LQ8IV03 231 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 OR4N2Q8NGD1 307 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 RFWD2Q8NHY2 731 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 GDPD5Q8WTR4 605 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 USP13Q92995 863 aaPredicted RBP4.39□□□□□ -1.71
EDEM3-205ENST00000466606 HVCN1Q96D96 273 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 FAM122AQ96E09 287 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 ZNF333Q96JL9 665 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 WACQ9BTA9 647 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 PNNQ9H307 717 aaKnown RBP4.39□□□□□ -1.71
EDEM3-205ENST00000466606 ENTPD7Q9NQZ7 604 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 TERF2IPQ9NYB0 399 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 CTNNAL1Q9UBT7 734 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 CLDN16Q9Y5I7 305 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 SLIT2O94813 1529 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 KIF24Q5T7B8 1368 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 PHRF1Q9P1Y6 1649 aaKnown RBP4.39□□□□□ -1.71
EDEM3-205ENST00000466606 SZT2Q5T011 3432 aa4.39□□□□□ -1.71
EDEM3-205ENST00000466606 ANKARQ7Z5J8 1434 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 NCOA3Q9Y6Q9 1424 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.38□□□□□ -1.71
EDEM3-205ENST00000466606 FMN2Q9NZ56 1722 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 ABCC6O95255 1503 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 PABPN1LA6NDY0 278 aaKnown RBP4.38□□□□□ -1.71
EDEM3-205ENST00000466606 INAFM1C9JVW0 142 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 NPHP1O15259 732 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 RGS14O43566 566 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 LDB2O43679 373 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 LIASO43766 372 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 LCATP04180 440 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 SNHG28P0DPA3 235 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 CDC25AP30304 524 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 HTR6P50406 440 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 TUBP50607 506 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 RASSF2P50749 326 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 SLC18A2Q05940 514 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.38□□□□□ -1.71
EDEM3-205ENST00000466606 ZNF284Q2VY69 593 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 EDRF1Q3B7T1 1238 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 ZNF667Q5HYK9 610 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 FNBP1LQ5T0N5 605 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 LRCH2Q5VUJ6 765 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 IL20RBQ6UXL0 311 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 C9orf47Q6ZRZ4 202 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 HEATR4Q86WZ0 1026 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 TMTC1Q8IUR5 882 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 CPXM2Q8N436 756 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 GPT2Q8TD30 523 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 SLC35F5Q8WV83 523 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 PPM1EQ8WY54 764 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 SH3KBP1Q96B97 665 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 GFM1Q96RP9 751 aaKnown RBP4.38□□□□□ -1.71
EDEM3-205ENST00000466606 LBHD1Q9BQE6 289 aaPredicted RBP4.38□□□□□ -1.71
EDEM3-205ENST00000466606 EIF2AK1Q9BQI3 630 aaKnown RBP4.38□□□□□ -1.71
EDEM3-205ENST00000466606 NPFFR1Q9GZQ6 430 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 MVB12BQ9H7P6 319 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 CATSPERBQ9H7T0 1116 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 PEMTQ9UBM1 199 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 FBXO40Q9UH90 709 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 LRRFIP2Q9Y608 721 aaKnown RBP4.38□□□□□ -1.71
EDEM3-205ENST00000466606 KIF1AQ12756 1690 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 TMEM2Q9UHN6 1383 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 PPIP5K1Q6PFW1 1433 aa4.38□□□□□ -1.71
EDEM3-205ENST00000466606 A0A096LPK6 155 aa4.37□□□□□ -1.71
EDEM3-205ENST00000466606 MS4A18H0YCH9 400 aa4.37□□□□□ -1.71
EDEM3-205ENST00000466606 EYA2O00167 538 aa4.37□□□□□ -1.71
EDEM3-205ENST00000466606 OAZ2O95190 189 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms