RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SOCS5O75159 536 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 PAK4O96013 591 aaPredicted RBP12.47□□□□□ -0.41
CHPF2-202ENST00000465601 RBL1P28749 1068 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 CD86P42081 329 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 SUOXP51687 545 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 EIF3EP60228 445 aaKnown RBP12.47□□□□□ -0.41
CHPF2-202ENST00000465601 POLR2LP62875 67 aaKnown RBP12.47□□□□□ -0.41
CHPF2-202ENST00000465601 FAM193AP78312 1265 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 WASHC5Q12768 1159 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 FGL2Q14314 439 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 TMEM52BQ4KMG9 183 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 TMEM259Q4ZIN3 620 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 SETMARQ53H47 684 aaPredicted RBP12.47□□□□□ -0.41
CHPF2-202ENST00000465601 SLC45A4Q5BKX6 768 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 ARMC12Q5T9G4 340 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 SEL1L2Q5TEA6 688 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 ALG1LQ6GMV1 187 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 KIAA1161Q6NSJ0 714 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 LAYNQ6UX15 382 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 CXorf40AQ8TE69 158 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 HTR3CQ8WXA8 447 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 TEKT5Q96M29 485 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 MYOCQ99972 504 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 WRAP53Q9BUR4 548 aaKnown RBP12.47□□□□□ -0.41
CHPF2-202ENST00000465601 TLR10Q9BXR5 811 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 SLC17A9Q9BYT1 436 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 AASDHPPTQ9NRN7 309 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 TPX2Q9ULW0 747 aaKnown RBP12.47□□□□□ -0.41
CHPF2-202ENST00000465601 CHKBQ9Y259 395 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 CA5BQ9Y2D0 317 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 R3HDM2Q9Y2K5 976 aaKnown RBP12.47□□□□□ -0.41
CHPF2-202ENST00000465601 PCDH15Q96QU1 1955 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 A0A1B0GVT2 93 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 LNP1A1A4G5 178 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 USP27XA6NNY8 438 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 A8MX80 341 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 MTSS1O43312 755 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 PGLSO95336 258 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 CPP00450 1065 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 MMP2P08253 660 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 PDHA1P08559 390 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 RBP3P10745 1247 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 ENGP17813 658 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 NUDT1P36639 197 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 AFF3P51826 1226 aaKnown RBP12.46□□□□□ -0.41
CHPF2-202ENST00000465601 RACK1P63244 317 aaKnown RBP12.46□□□□□ -0.41
CHPF2-202ENST00000465601 SKOR1P84550 965 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 ELP6Q0PNE2 266 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 SGCGQ13326 291 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 KLF1Q13351 362 aaPredicted RBP12.46□□□□□ -0.41
CHPF2-202ENST00000465601 TEAD4Q15561 434 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 ZNF569Q5MCW4 686 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 NAPEPLDQ6IQ20 393 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 ERAP2Q6P179 960 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 DARS2Q6PI48 645 aaKnown RBP12.46□□□□□ -0.41
CHPF2-202ENST00000465601 PID1Q7Z2X4 250 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 ADAT2Q7Z6V5 191 aaKnown RBP12.46□□□□□ -0.41
CHPF2-202ENST00000465601 SLC13A5Q86YT5 568 aaPredicted RBP12.46□□□□□ -0.41
CHPF2-202ENST00000465601 PIH1D2Q8WWB5 315 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 RBM15Q96T37 977 aaKnown RBP eCLIP12.46□□□□□ -0.412e-7■■■■■ 31.6
CHPF2-202ENST00000465601 GTPBP2Q9BX10 602 aaKnown RBP12.46□□□□□ -0.41
CHPF2-202ENST00000465601 C1QTNF2Q9BXJ5 285 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 SLC25A51Q9H1U9 297 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 GLOD4Q9HC38 313 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 FZD3Q9NPG1 666 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 PHTF1Q9UMS5 762 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 DMTF1Q9Y222 760 aa12.46□□□□□ -0.41
CHPF2-202ENST00000465601 ARID1BQ8NFD5 2236 aaPredicted RBP12.46□□□□□ -0.42
CHPF2-202ENST00000465601 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.45□□□□□ -0.42
CHPF2-202ENST00000465601 A0A1W2PQ67 120 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 A0A1W2PR77 199 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 F5H423 210 aaPredicted RBP12.45□□□□□ -0.42
CHPF2-202ENST00000465601 PRAMEF26H0Y7S4 382 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 ARHGAP33O14559 1287 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 ENC1O14682 589 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 RAD51BO15315 384 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 FZD6O60353 706 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 FOXD2O60548 495 aaPredicted RBP12.45□□□□□ -0.42
CHPF2-202ENST00000465601 WNT1P04628 370 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 SYPP08247 313 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 CTPS1P17812 591 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 HNRNPA2B1P22626 353 aaKnown RBP12.45□□□□□ -0.42
CHPF2-202ENST00000465601 CD38P28907 300 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 AKT2P31751 481 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 CXCR5P32302 372 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 CD68P34810 354 aaPredicted RBP12.45□□□□□ -0.42
CHPF2-202ENST00000465601 MMP12P39900 470 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 GRIA4P48058 902 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 LIG3P49916 1009 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 BNC1Q01954 994 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 LMNB2Q03252 620 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 GRIK2Q13002 908 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 STAT4Q14765 748 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 PTPRRQ15256 657 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 KDELC2Q7Z4H8 507 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 CDKL3Q8IVW4 592 aaPredicted RBP12.45□□□□□ -0.42
CHPF2-202ENST00000465601 ZNF567Q8N184 647 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 SLC35F6Q8N357 371 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 TTC13Q8NBP0 860 aa12.45□□□□□ -0.42
CHPF2-202ENST00000465601 OR2I1PQ8NGU4 316 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms