RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 ATP8A1Q9Y2Q0 1164 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 TDRD6O60522 2096 aaKnown RBP13.06□□□□□ -0.32
XRN1-203ENST00000463916 SPTY2D1-AS1A0A0U1RR47 76 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 FPGTO14772 594 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 HTRA2O43464 458 aaPredicted RBP13.06□□□□□ -0.32
XRN1-203ENST00000463916 C6P13671 934 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 NOP2P46087 812 aaKnown RBP13.06□□□□□ -0.32
XRN1-203ENST00000463916 SUOXP51687 545 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 ELP6Q0PNE2 266 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 ZSCAN30Q86W11 494 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 LRRC49Q8IUZ0 686 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 OXR1Q8N573 874 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 MAML1Q92585 1016 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 RNF25Q96BH1 459 aaPredicted RBP13.06□□□□□ -0.32
XRN1-203ENST00000463916 SCUBE2Q9NQ36 999 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 REXO2Q9Y3B8 237 aaKnown RBP13.06□□□□□ -0.32
XRN1-203ENST00000463916 ALG6Q9Y672 507 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 EPN1Q9Y6I3 576 aaPredicted RBP13.06□□□□□ -0.32
XRN1-203ENST00000463916 CELSR3Q9NYQ7 3312 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 MATN3O15232 486 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 YKT6O15498 198 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 TNFSF14O43557 240 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 DKK1O94907 266 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 GIMD1P0DJR0 217 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 GM2AP17900 193 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 DGKAP23743 735 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 HSPA9P38646 679 aaKnown RBP13.05□□□□□ -0.32
XRN1-203ENST00000463916 RABIFP47224 123 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 HADHBP55084 474 aaKnown RBP13.05□□□□□ -0.32
XRN1-203ENST00000463916 TRAF2Q12933 501 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 DNAJC3Q13217 504 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 PDE1CQ14123 709 aaPredicted RBP13.05□□□□□ -0.32
XRN1-203ENST00000463916 WSCD2Q2TBF2 565 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 LRRC38Q5VT99 294 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 RAD9BQ6WBX8 426 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.05□□□□□ -0.32
XRN1-203ENST00000463916 DENND6BQ8NEG7 585 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 PDCD6IPQ8WUM4 868 aaKnown RBP13.05□□□□□ -0.32
XRN1-203ENST00000463916 ADAMTS14Q8WXS8 1223 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 TSGA13Q96PP4 275 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 LGMNQ99538 433 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 DUSP10Q9Y6W6 482 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 LAMA5O15230 3695 aa13.05□□□□□ -0.32
XRN1-203ENST00000463916 MAP1BP46821 2468 aaKnown RBP13.05□□□□□ -0.32
XRN1-203ENST00000463916 TRIM38O00635 465 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 NDUFA10O95299 355 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 CCNCP24863 283 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 SLC1A1P43005 524 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 IRF4Q15306 451 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 LLGL1Q15334 1064 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 IFI16Q16666 785 aaKnown RBP13.04□□□□□ -0.32
XRN1-203ENST00000463916 SLC9A4Q6AI14 798 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 ERAP2Q6P179 960 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 MFSD7Q6UXD7 560 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 NPNTQ6UXI9 565 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 NYAP1Q6ZVC0 841 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 RHOT1Q8IXI2 618 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 FAM174AQ8TBP5 190 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 NSMCE1Q8WV22 266 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 SMIM14Q96QK8 99 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 SEMA3CQ99985 751 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 DNAJC28Q9NX36 388 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 FTSJ1Q9UET6 329 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 HEY1Q9Y5J3 304 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 A0A0U1RQS6 177 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.04□□□□□ -0.32
XRN1-203ENST00000463916 PIAS2O75928 621 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 KRT1P04264 644 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 PDHA1P08559 390 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 CCNB1P14635 433 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 EIF2B5Q13144 721 aaKnown RBP13.04□□□□□ -0.32
XRN1-203ENST00000463916 SPA17Q15506 151 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 LIPIQ6XZB0 460 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 B4GALNT4Q76KP1 1039 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 DCP2Q8IU60 420 aaKnown RBP13.04□□□□□ -0.32
XRN1-203ENST00000463916 TMTC1Q8IUR5 882 aa13.04□□□□□ -0.32
XRN1-203ENST00000463916 TMEM121BQ9BXQ6 578 aaPredicted RBP13.04□□□□□ -0.32
XRN1-203ENST00000463916 RBM22Q9NW64 420 aaKnown RBP eCLIP13.04□□□□□ -0.32
XRN1-203ENST00000463916 APOBEC2Q9Y235 224 aaKnown RBP13.04□□□□□ -0.32
XRN1-203ENST00000463916 COL5A1P20908 1838 aaPredicted RBP13.04□□□□□ -0.32
XRN1-203ENST00000463916 ZNF487B1APH4 448 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 KCNK1O00180 336 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 SPOPO43791 374 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 SOCS5O75159 536 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 NEBLO76041 1014 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 TRIM16O95361 564 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 CSF2P04141 144 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 CYLC1P35663 651 aaPredicted RBP13.03□□□□□ -0.32
XRN1-203ENST00000463916 MARCKSL1P49006 195 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 POLR2LP62875 67 aaKnown RBP13.03□□□□□ -0.32
XRN1-203ENST00000463916 DSC2Q02487 901 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 ADCY2Q08462 1091 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 ITKQ08881 620 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 INPP5AQ14642 412 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 LRRC14Q15048 493 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 AGERQ15109 404 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 INAVAQ3KP66 663 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 CCDC157Q569K6 752 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 DPPA4Q7L190 304 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms