RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 WDCPQ9H6R7 721 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 EVA1BQ9NVM1 165 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 DNAJC28Q9NX36 388 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 SLC12A6Q9UHW9 1150 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 XPO7Q9UIA9 1087 aaKnown RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 KLF15Q9UIH9 416 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 PPM1HQ9ULR3 514 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 TFR2Q9UP52 801 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 A0A0U1RQJ8 604 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 A0A1W2PQU0 124 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 CPED1A4D0V7 1026 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 ALOX15BO15296 676 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 APOEP02649 317 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 CSF2P04141 144 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 SFTPCP11686 197 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 HNRNPA2B1P22626 353 aaKnown RBP11.31□□□□□ -0.6
SSR3-202ENST00000463503 HTR7P34969 479 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 ADRA1BP35368 520 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 FOXK1P85037 733 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 ATP11AP98196 1134 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 SLC25A11Q02978 314 aaKnown RBP11.31□□□□□ -0.6
SSR3-202ENST00000463503 FZD2Q14332 565 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 MESDQ14696 234 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 TBR1Q16650 682 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 C5orf22Q49AR2 442 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 BOLA3Q53S33 107 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 RNF219Q5W0B1 726 aaPredicted RBP11.31□□□□□ -0.6
SSR3-202ENST00000463503 CYP4V2Q6ZWL3 525 aaPredicted RBP11.31□□□□□ -0.6
SSR3-202ENST00000463503 B3GNT8Q7Z7M8 397 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 HORMAD1Q86X24 394 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 VSIG1Q86XK7 387 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 FAM71BQ8TC56 605 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 OR8D1Q8WZ84 308 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 DDX50Q9BQ39 737 aaKnown RBP11.31□□□□□ -0.6
SSR3-202ENST00000463503 BOCQ9BWV1 1114 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 SLC25A18Q9H1K4 315 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 RETREG1Q9H6L5 497 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 TRIM10Q9UDY6 481 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 ZFR2Q9UPR6 939 aaKnown RBP11.31□□□□□ -0.6
SSR3-202ENST00000463503 ZKSCAN5Q9Y2L8 839 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 ALG6Q9Y672 507 aa11.31□□□□□ -0.6
SSR3-202ENST00000463503 ARHGEF17Q96PE2 2063 aaPredicted RBP11.31□□□□□ -0.6
SSR3-202ENST00000463503 TYW5A2RUC4 315 aaKnown RBP11.3□□□□□ -0.6
SSR3-202ENST00000463503 GRID2IPA4D2P6 1211 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 A6NNZ2 444 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 RNF103O00237 685 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 NTN3O00634 580 aaPredicted RBP11.3□□□□□ -0.6
SSR3-202ENST00000463503 PSTPIP1O43586 416 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 MOCS3O95396 460 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 CTSLP07711 333 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 KRT7P08729 469 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 LIPCP11150 499 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 MIPP30301 263 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 VASPP50552 380 aaPredicted RBP11.3□□□□□ -0.6
SSR3-202ENST00000463503 INHBCP55103 352 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 HNRNPKP61978 463 aaKnown RBP eCLIP11.3□□□□□ -0.6
SSR3-202ENST00000463503 NME3Q13232 169 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 HADHQ16836 314 aaKnown RBP11.3□□□□□ -0.6
SSR3-202ENST00000463503 CDO1Q16878 200 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 DEFB133Q30KQ1 61 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 TMEM259Q4ZIN3 620 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 ZC3H12AQ5D1E8 599 aaKnown RBP11.3□□□□□ -0.6
SSR3-202ENST00000463503 TPRG1LQ5T0D9 272 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 ERMARDQ5T6L9 678 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 FAM46CQ5VWP2 391 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 KYAT3Q6YP21 454 aaKnown RBP11.3□□□□□ -0.6
SSR3-202ENST00000463503 SLC35F3Q8IY50 421 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 TRIM58Q8NG06 486 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 BTBD6Q96KE9 485 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 TKTL2Q9H0I9 626 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 GEMIN8Q9NWZ8 242 aaKnown RBP11.3□□□□□ -0.6
SSR3-202ENST00000463503 NCKIPSDQ9NZQ3 722 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 SEPT3Q9UH03 358 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 FZD10Q9ULW2 581 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 GUCA1BQ9UMX6 200 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 CSNK1G3Q9Y6M4 447 aa11.3□□□□□ -0.6
SSR3-202ENST00000463503 RP1L1Q8IWN7 2480 aaPredicted RBP11.3□□□□□ -0.6
SSR3-202ENST00000463503 SPTY2D1-AS1A0A0U1RR47 76 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 MACROD2A1Z1Q3 448 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 POM121BA6NF01 834 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 ZNF487B1APH4 448 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 C1QTNF3-AMACRE9PGA6 284 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 I6L893 689 aaPredicted RBP11.29□□□□□ -0.6
SSR3-202ENST00000463503 RIOK3O14730 519 aaKnown RBP11.29□□□□□ -0.6
SSR3-202ENST00000463503 PLD2O14939 933 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 MCF2LO15068 1137 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 MUSKO15146 869 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 AQP9O43315 295 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 BUB1O43683 1085 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 ATP9BO43861 1147 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 PRPSAP2O60256 369 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 HGFP14210 728 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 COMTP21964 271 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 CTNNA2P26232 953 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 AKT2P31751 481 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 UGT1A5P35504 534 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 CYP4F2P78329 520 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 FGL2Q14314 439 aa11.29□□□□□ -0.6
SSR3-202ENST00000463503 NR0B2Q15466 257 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms