RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 ZNF148Q9UQR1 794 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 R3HDM2Q9Y2K5 976 aaKnown RBP19.93■□□□□ 0.78
COL9A3-204ENST00000463487 GOLGA6L10A0A0M3HER8 536 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 A0A1B0GTW7 788 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 PGRMC1O00264 195 aaKnown RBP19.92■□□□□ 0.78
COL9A3-204ENST00000463487 RIOK3O14730 519 aaKnown RBP19.92■□□□□ 0.78
COL9A3-204ENST00000463487 ANXA9O76027 345 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 CYP2A6P11509 494 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-204ENST00000463487 NFKB1P19838 968 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 MAT2AP31153 395 aaKnown RBP19.92■□□□□ 0.78
COL9A3-204ENST00000463487 GRIA4P48058 902 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 PPP2CBP62714 309 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 PPP2CAP67775 309 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 SKOR1P84550 965 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 NIPAL4Q0D2K0 466 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 CCNG2Q16589 344 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 LRRC73Q5JTD7 316 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 ARHGEF18Q6ZSZ5 1173 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 C12orf50Q8NA57 414 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-204ENST00000463487 ATG4AQ8WYN0 398 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 SPATA13Q96N96 652 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 FCRL5Q96RD9 977 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 NUSAP1Q9BXS6 441 aaKnown RBP19.92■□□□□ 0.78
COL9A3-204ENST00000463487 GBA3Q9H227 469 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 FAM153AQ9UHL3 310 aa19.92■□□□□ 0.78
COL9A3-204ENST00000463487 AAR2Q9Y312 384 aaKnown RBP19.92■□□□□ 0.78
COL9A3-204ENST00000463487 ATXN2Q99700 1313 aaKnown RBP19.92■□□□□ 0.78
COL9A3-204ENST00000463487 C5orf60A6NFR6 353 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 PRAMEF26H0Y7S4 382 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 KHNYNO15037 678 aaKnown RBP19.91■□□□□ 0.78
COL9A3-204ENST00000463487 BCAT2O15382 392 aaPredicted RBP19.91■□□□□ 0.78
COL9A3-204ENST00000463487 TM7SF2O76062 418 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 CFIP05156 583 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 AKT2P31751 481 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 MMP12P39900 470 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 AFF3P51826 1226 aaKnown RBP19.91■□□□□ 0.78
COL9A3-204ENST00000463487 RACK1P63244 317 aaKnown RBP19.91■□□□□ 0.78
COL9A3-204ENST00000463487 SPEM2Q0P670 501 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 TMEM52BQ4KMG9 183 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 ANKRD20A2Q5SQ80 823 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 ANKRD20A1Q5TYW2 823 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 ANKRD20A3Q5VUR7 823 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 NAPEPLDQ6IQ20 393 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 RASGEF1CQ8N431 466 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 ZCCHC9Q8N567 271 aaKnown RBP19.91■□□□□ 0.78
COL9A3-204ENST00000463487 SERAC1Q96JX3 654 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 TMEM121Q9BTD3 319 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 FSD1LQ9BXM9 530 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 TTC7AQ9ULT0 858 aaPredicted RBP19.91■□□□□ 0.78
COL9A3-204ENST00000463487 CHKBQ9Y259 395 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 ITM2BQ9Y287 266 aa19.91■□□□□ 0.78
COL9A3-204ENST00000463487 SDK1Q7Z5N4 2213 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 FZD6O60353 706 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 ITGAVP06756 1048 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 MMP2P08253 660 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 ELFN1P0C7U0 828 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 ZNF806P0C7X5 589 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 PRLRP16471 622 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 HNRNPA2B1P22626 353 aaKnown RBP19.9■□□□□ 0.78
COL9A3-204ENST00000463487 MAOBP27338 520 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 GEMP55040 296 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 MPP3Q13368 585 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 ARHGEF7Q14155 803 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 STAT4Q14765 748 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 CSRP2Q16527 193 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 PCSK7Q16549 785 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 ZNF284Q2VY69 593 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 P3H1Q32P28 736 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 TMEM259Q4ZIN3 620 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 PLA2G2CQ5R387 149 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 DRICH1Q6PGQ1 229 aaPredicted RBP19.9■□□□□ 0.78
COL9A3-204ENST00000463487 DPPA4Q7L190 304 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 ZSWIM9Q86XI8 627 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 CCDC89Q8N998 374 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 FAM71DQ8N9W8 422 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 LPCAT1Q8NF37 534 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 ACTRT1Q8TDG2 376 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 C1orf54Q8WWF1 131 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 ASB12Q8WXK4 309 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 RMDN1Q96DB5 314 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 SCRN2Q96FV2 425 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 SRPK1Q96SB4 655 aaKnown RBP19.9■□□□□ 0.78
COL9A3-204ENST00000463487 WRAP53Q9BUR4 548 aaKnown RBP19.9■□□□□ 0.78
COL9A3-204ENST00000463487 SLC17A9Q9BYT1 436 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 C10orf88Q9H8K7 445 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 USP29Q9HBJ7 922 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 AASDHPPTQ9NRN7 309 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 SEMA4GQ9NTN9 838 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 KCTD5Q9NXV2 234 aa19.9■□□□□ 0.78
COL9A3-204ENST00000463487 TNRC6BQ9UPQ9 1833 aaKnown RBP19.9■□□□□ 0.78
COL9A3-204ENST00000463487 C10orf142B7Z368 130 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 SLC31A1O15431 190 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 LZTS3O60299 673 aaPredicted RBP19.89■□□□□ 0.77
COL9A3-204ENST00000463487 MAGEC1O60732 1142 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 PMPCBO75439 489 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 VIPR1P32241 457 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 CD68P34810 354 aaPredicted RBP19.89■□□□□ 0.77
COL9A3-204ENST00000463487 LMNB2Q03252 620 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 CDK18Q07002 472 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 SNX1Q13596 522 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms