RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ITIH5Q86UX2 942 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 FSTL5Q8N475 847 aaPredicted RBP12.89□□□□□ -0.35
VAPB-203ENST00000463370 SLC7A6OSQ96CW6 309 aaPredicted RBP12.89□□□□□ -0.35
VAPB-203ENST00000463370 ZBED2Q9BTP6 218 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 RETREG1Q9H6L5 497 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 ARHGEF3Q9NR81 526 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 HCFC1R1Q9NWW0 138 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 KCNK4Q9NYG8 393 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 OR51B4Q9Y5P0 310 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 K7ERQ8 282 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 EPOP01588 193 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 CKMP06732 381 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 STMN1P16949 149 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 DNAJB1P25685 340 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 CSKP41240 450 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 CCR2P41597 374 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 LBX1P52954 281 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 ELF3P78545 371 aaPredicted RBP12.88□□□□□ -0.35
VAPB-203ENST00000463370 TTC31Q49AM3 519 aaPredicted RBP12.88□□□□□ -0.35
VAPB-203ENST00000463370 BBS7Q8IWZ6 715 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 CLP1Q92989 425 aaKnown RBP12.88□□□□□ -0.35
VAPB-203ENST00000463370 UTP4Q969X6 686 aaKnown RBP12.88□□□□□ -0.35
VAPB-203ENST00000463370 TMA16Q96EY4 203 aaKnown RBP12.88□□□□□ -0.35
VAPB-203ENST00000463370 FEM1AQ9BSK4 669 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 TDRD1Q9BXT4 1180 aaKnown RBP12.88□□□□□ -0.35
VAPB-203ENST00000463370 MFSD1Q9H3U5 465 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 ARL8BQ9NVJ2 186 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 ACOT9Q9Y305 439 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 CCDC162PA2VCL2 907 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 TARM1B6A8C7 271 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 FCHO1O14526 889 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 CCL16O15467 120 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 SLC7A4O43246 635 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 NDST3O95803 873 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 S1PR4O95977 384 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 GOT2P00505 430 aaKnown RBP12.88□□□□□ -0.35
VAPB-203ENST00000463370 SLC4A1P02730 911 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 SKIV2L2P42285 1042 aaKnown RBP12.88□□□□□ -0.35
VAPB-203ENST00000463370 ABCE1P61221 599 aaKnown RBP12.88□□□□□ -0.35
VAPB-203ENST00000463370 PRAMEP78395 509 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 ACVR1Q04771 509 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 ZBTB16Q05516 673 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 KIAA0408Q6ZU52 694 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 KREMEN2Q8NCW0 462 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 MDGA1Q8NFP4 955 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 PIWIL2Q8TC59 973 aaKnown RBP12.88□□□□□ -0.35
VAPB-203ENST00000463370 BRSK1Q8TDC3 778 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 ALG14Q96F25 216 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 TCF25Q9BQ70 676 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 OXSMQ9NWU1 459 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 CFAP97Q9P2B7 532 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 XPR1Q9UBH6 696 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 VPS28Q9UK41 221 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 FCF1Q9Y324 198 aaKnown RBP12.88□□□□□ -0.35
VAPB-203ENST00000463370 ANAPC1Q9H1A4 1944 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 CHD5Q8TDI0 1954 aa12.88□□□□□ -0.35
VAPB-203ENST00000463370 A8MUI8 341 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 LUC7L3O95232 432 aaKnown RBP12.87□□□□□ -0.35
VAPB-203ENST00000463370 FGBP02675 491 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 LRG1P02750 347 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 SLC8A1P32418 973 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 CDKN2DP55273 166 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 RFTN1Q14699 578 aaPredicted RBP12.87□□□□□ -0.35
VAPB-203ENST00000463370 PABPC1LQ4VXU2 614 aaKnown RBP12.87□□□□□ -0.35
VAPB-203ENST00000463370 VWA5B1Q5TIE3 1220 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 LRRC8EQ6NSJ5 796 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 APCDD1Q8J025 514 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 BBS5Q8N3I7 341 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 RIN3Q8TB24 985 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 HEXDCQ8WVB3 486 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 RMDN1Q96DB5 314 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 SCYL1Q96KG9 808 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 CORO1BQ9BR76 489 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 GATA5Q9BWX5 397 aaPredicted RBP12.87□□□□□ -0.35
VAPB-203ENST00000463370 IGSF5Q9NSI5 407 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 KLC4Q9NSK0 619 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 TXLNGQ9NUQ3 528 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 VPS51Q9UID3 782 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 ANKRD6Q9Y2G4 727 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 CRYL1Q9Y2S2 319 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 RAI2Q9Y5P3 530 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 KIAA1671Q9BY89 1806 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 XIRP2A4UGR9 3374 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 ZNF195O14628 629 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 CHRNGP07510 517 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 GRK2P25098 689 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 HNRNPH1P31943 449 aaKnown RBP12.87□□□□□ -0.35
VAPB-203ENST00000463370 TRAF2Q12933 501 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 USP4Q13107 963 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 ATXN7L2Q5T6C5 722 aaPredicted RBP12.87□□□□□ -0.35
VAPB-203ENST00000463370 PLPP4Q5VZY2 271 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 TMEM207Q6UWW9 146 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 TPGS1Q6ZTW0 290 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 PIM3Q86V86 326 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 ZNF781Q8N8C0 355 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 HJURPQ8NCD3 748 aaPredicted RBP12.87□□□□□ -0.35
VAPB-203ENST00000463370 LPCAT1Q8NF37 534 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 AGR3Q8TD06 166 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 CALML6Q8TD86 181 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms