RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 GRAMD4Q6IC98 578 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 C11orf63Q6NUN7 778 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 DCUN1D2Q6PH85 259 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 TPGS1Q6ZTW0 290 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 ANKS1BQ7Z6G8 1248 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 C1orf210Q8IVY1 113 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 LRRC8AQ8IWT6 810 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 AHI1Q8N157 1196 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 RTL3Q8N8U3 475 aaKnown RBP5.88□□□□□ -1.47
VPS36-202ENST00000462289 PRSS33Q8NF86 280 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 SLC35G2Q8TBE7 412 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 FRS2Q8WU20 508 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 UBE2Q2Q8WVN8 375 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 CTNNBL1Q8WYA6 563 aaPredicted RBP5.88□□□□□ -1.47
VPS36-202ENST00000462289 FATE1Q969F0 183 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 EXOC4Q96A65 974 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 XPO6Q96QU8 1125 aaKnown RBP5.88□□□□□ -1.47
VPS36-202ENST00000462289 PSMB7Q99436 277 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 BAG1Q99933 345 aaPredicted RBP5.88□□□□□ -1.47
VPS36-202ENST00000462289 FEM1AQ9BSK4 669 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 SNRNP25Q9BV90 132 aaKnown RBP5.88□□□□□ -1.47
VPS36-202ENST00000462289 SGPP1Q9BX95 441 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 FAM126AQ9BYI3 521 aaPredicted RBP5.88□□□□□ -1.47
VPS36-202ENST00000462289 LRRC19Q9H756 370 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 LMAN1LQ9HAT1 526 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 ARHGEF4Q9NR80 690 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 RBM12Q9NTZ6 932 aaKnown RBP5.88□□□□□ -1.47
VPS36-202ENST00000462289 DNAJC17Q9NVM6 304 aaKnown RBP5.88□□□□□ -1.47
VPS36-202ENST00000462289 ELOVL2Q9NXB9 296 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 OR12D3Q9UGF7 316 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 SLC12A6Q9UHW9 1150 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 MMP17Q9ULZ9 603 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 USP18Q9UMW8 372 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 DNAH14Q0VDD8 3507 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 TP53BP1Q12888 1972 aaPredicted RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 RALGAPA1Q6GYQ0 2036 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 CABIN1Q9Y6J0 2220 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 PTPRZ1P23471 2315 aaPredicted RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 SGK1O00141 431 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 MYO1FO00160 1098 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 FGF10O15520 208 aaPredicted RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 ARHGAP6O43182 974 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 TBL1XO60907 577 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 ZNF821O75541 412 aaPredicted RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 ASLP04424 464 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 CYBBP04839 570 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 APODP05090 189 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 DCNP07585 359 aaKnown RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 SRPRAP08240 638 aaKnown RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 DLDP09622 509 aaKnown RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 PNLIPP16233 465 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 PSMA2P25787 234 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 CYLC1P35663 651 aaPredicted RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 SLC1A1P43005 524 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 CCR3P51677 355 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 YBEYP58557 167 aaPredicted RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 ERVFRD-1P60508 538 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 YBX1P67809 324 aaKnown RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 UBXN2BQ14CS0 331 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 E2F5Q15329 346 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 CRY1Q16526 586 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 CA9Q16790 459 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 ARL13BQ3SXY8 428 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 RABGAP1LQ5R372 815 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 EGFLAMQ63HQ2 1017 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 CEP128Q6ZU80 1094 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 NLRC3Q7RTR2 1065 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 PHLDB2Q86SQ0 1253 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 CHSY1Q86X52 802 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 CPNE8Q86YQ8 564 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 ARHGAP12Q8IWW6 846 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 LGI2Q8N0V4 545 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 PYROXD2Q8N2H3 581 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 CAMKK1Q8N5S9 505 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 DCAF4L2Q8NA75 395 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 CCDC112Q8NEF3 446 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 DDI1Q8WTU0 396 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 KCNC2Q96PR1 638 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 ZNF670Q9BS34 389 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS36-202ENST00000462289 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 KRTAP4-5Q9BYR2 181 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 ZYG11BQ9C0D3 744 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 PRDM14Q9GZV8 571 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 PRDM16Q9HAZ2 1276 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 PDFQ9HBH1 243 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 PARD6AQ9NPB6 346 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 ABCB8Q9NUT2 735 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 SEPT11Q9NVA2 429 aaKnown RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 PLK2Q9NYY3 685 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 CWC15Q9P013 229 aaKnown RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 KIAA1522Q9P206 1035 aaPredicted RBP5.87□□□□□ -1.47
VPS36-202ENST00000462289 ANAPC7Q9UJX3 599 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 GGA2Q9UJY4 613 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 VANGL2Q9ULK5 521 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 KCTD3Q9Y597 815 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 PCDHA13Q9Y5I0 950 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 SNX10Q9Y5X0 201 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 TRPM6Q9BX84 2022 aa5.87□□□□□ -1.47
VPS36-202ENST00000462289 DCHS1Q96JQ0 3298 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms