RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ITGB1P05556 798 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 THP07101 528 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 FESP07332 822 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 LINC00271P0C7V0 271 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 STAG3L1P0CL83 205 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 PNMA6AP0CW24 399 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 CXCL8P10145 99 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 GAP43P17677 238 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 CD53P19397 219 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 PROZP22891 400 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 PRCPP42785 496 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 KCNJ5P48544 419 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 CCT5P48643 541 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 PIK3CGP48736 1102 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 HSPA7P48741 367 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 LIG4P49917 911 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 EFNA5P52803 228 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 ARFIP2P53365 341 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 TAP1Q03518 808 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 FOXD4Q12950 439 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 SP140Q13342 867 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 BTG3Q14201 252 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 STARD3Q14849 445 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 FAM187BQ17R55 369 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 AAK1Q2M2I8 961 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 MPEG1Q2M385 716 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 ALFQ53S48 1182 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 HSP90AA4PQ58FG1 418 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 PRAMEF14Q5SWL7 426 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 NOTUMQ6P988 496 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC27A1Q6PCB7 646 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 FBXO38Q6PIJ6 1188 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 TMCO3Q6UWJ1 677 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 CRELD2Q6UXH1 353 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC24A5Q71RS6 500 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 PDZD4Q76G19 769 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 MRPL10Q7Z7H8 261 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 CBWD2Q8IUF1 395 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 DCBLD1Q8N8Z6 715 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF527Q8NB42 609 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 OR10H5Q8NGA6 315 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 OR6B3Q8NGW1 331 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 FAM76AQ8TAV0 307 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 MDM1Q8TC05 714 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 HASPINQ8TF76 798 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 GDPD5Q8WTR4 605 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 ZFAND2BQ8WV99 257 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 ARNTL2Q8WYA1 636 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 SMARCE1Q969G3 411 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 TRIM63Q969Q1 353 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 NMD3Q96D46 503 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 ZG16BQ96DA0 208 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 CABS1Q96KC9 395 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 ACCSQ96QU6 501 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 YME1L1Q96TA2 773 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 FAM213AQ9BRX8 229 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 MSTO1Q9BUK6 570 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 TTLL2Q9BWV7 592 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 GPR87Q9BY21 358 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 TRIM54Q9BYV2 358 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 MYLK2Q9H1R3 596 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 C2orf40Q9H1Z8 148 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 CUEDC2Q9H467 287 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 ALG13Q9NP73 1137 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 TBC1D13Q9NVG8 400 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 QPCTLQ9NXS2 382 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 MOCS1Q9NZB8 636 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 KCND2Q9NZV8 630 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 TUBGCP4Q9UGJ1 667 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 RUVBL1Q9Y265 456 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 TNFSF13BQ9Y275 285 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 WDR37Q9Y2I8 494 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 PRG3Q9Y2Y8 225 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 PCDHB7Q9Y5E2 793 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 SQORQ9Y6N5 450 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 NLRC5Q86WI3 1866 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF318Q5VUA4 2279 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 TDRD15B5MCY1 1934 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 ATG2AQ2TAZ0 1938 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 MAST4O15021 2626 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 ACACBO00763 2458 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 SCN1AP35498 2009 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 PLXNA4Q9HCM2 1894 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 A0A0B4J269 797 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 PVALEFA0A1B0GWK0 134 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 A0A1W2PPC4 97 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 BICDL2A1A5D9 508 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 CASTOR2A6NHX0 329 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 LACTBL1A8MY62 500 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 F8VZ95 297 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 BTN3A1O00481 513 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 GRM6O15303 877 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 FFAR2O15552 330 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 TEX33O43247 280 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 MTSS1O43312 755 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 BAIAP3O94812 1187 aa5.01□□□□□ -1.61
ATPAF1-203ENST00000460928 TOX4O94842 621 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms