RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 LPCAT1Q8NF37 534 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 ARRDC3Q96B67 414 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 PPP1R16AQ96I34 528 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 MFSD1Q9H3U5 465 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 POLR3BQ9NW08 1133 aaPredicted RBP16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 NFU1Q9UMS0 254 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 C16orf96A6NNT2 1141 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 E7ESA3 106 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 KPNA3O00505 521 aaPredicted RBP16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 PDGFBP01127 241 aaPredicted RBP16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 MYBL2P10244 700 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 PSMD8P48556 350 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 DGKEP52429 567 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 METAP1P53582 386 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 ARL4CP56559 192 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 HIF1AQ16665 826 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 QPCTQ16769 361 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 CFAP58Q5T655 872 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 PARS2Q7L3T8 475 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 TMPRSS6Q8IU80 811 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 SPEM1Q8N4L4 309 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 SLC25A41Q8N5S1 370 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 DNAAF3Q8N9W5 541 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 FLCNQ8NFG4 579 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 ERLEC1Q96DZ1 483 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 PWWP2AQ96N64 755 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 MCCC1Q96RQ3 725 aaPredicted RBP16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 FMO2Q99518 471 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 DLGAP2Q9P1A6 1054 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 MTRF1LQ9UGC7 380 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 PHTF1Q9UMS5 762 aa16.69■□□□□ 0.26
CCDC90B-202ENST00000455220 A0A0J9YYE9 177 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 AVILO75366 819 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 TRBC1P01850 177 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 C5AR1P21730 350 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 POLR2LP62875 67 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 ZBTB16Q05516 673 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 UGP2Q16851 508 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 FNBP1LQ5T0N5 605 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 PDIK1LQ8N165 341 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 FAM131CQ96AQ9 280 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 RMDN1Q96DB5 314 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 LYSMD1Q96S90 227 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 HDAC8Q9BY41 377 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 POLMQ9NP87 494 aaPredicted RBP16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 PIH1D1Q9NWS0 290 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 C2orf42Q9NWW7 574 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 SCML1Q9UN30 329 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 TCRBV21S2A2A0A5A6 115 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 TMEM221A6NGB7 291 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 UPK3BL1B0FP48 263 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 UPK3BL2E5RIL1 263 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 M0R296 226 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 MID1O15344 667 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 EIF3HO15372 352 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 DCNP07585 359 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 TIMP2P16035 220 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 AOC1P19801 751 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 SLC8A1P32418 973 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 DRD3P35462 400 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 NPY2RP49146 381 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 SUOXP51687 545 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 EPHB1P54762 984 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 SESN2P58004 480 aaPredicted RBP16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 POM121L1PQ3SYA9 428 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 MSS51Q4VC12 460 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 MAMSTRQ6ZN01 415 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 AGGF1Q8N302 714 aaeCLIP16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 SCRN2Q96FV2 425 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 MRGPRX1Q96LB2 322 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 TSPYL1Q9H0U9 437 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 PABPC3Q9H361 631 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 BFARQ9NZS9 450 aa16.68■□□□□ 0.26
CCDC90B-202ENST00000455220 CAPN8A6NHC0 703 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 GABRG2P18507 467 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 NDUFV2P19404 249 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 NEK3P51956 506 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 MTAPQ13126 283 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 DNAJC21Q5F1R6 531 aaKnown RBP16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 CERCAMQ5T4B2 595 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 ARMC3Q5W041 872 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 CENPUQ71F23 418 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 ERN2Q76MJ5 926 aaKnown RBP16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 GSPT2Q8IYD1 628 aaKnown RBP16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 AADATQ8N5Z0 425 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 PAF1Q8N7H5 531 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 LRRC39Q96DD0 335 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 SIPA1Q96FS4 1042 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 SIGLEC10Q96LC7 697 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 SRPK1Q96SB4 655 aaKnown RBP16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 IL22Q9GZX6 179 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 SLC6A17Q9H1V8 727 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 MAGEE1Q9HCI5 957 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 DYRK4Q9NR20 520 aa16.67■□□□□ 0.26
CCDC90B-202ENST00000455220 MYLKQ15746 1914 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 SDR42E2A6NKP2 422 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 DNTTP04053 509 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 ADRB3P13945 408 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 TPH1P17752 444 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms