RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 IL21RQ9HBE5 538 aa14.79□□□□□ -0.04
VPS16-205ENST00000453689 SAE1Q9UBE0 346 aaPredicted RBP14.79□□□□□ -0.04
VPS16-205ENST00000453689 GGT7Q9UJ14 662 aa14.79□□□□□ -0.04
VPS16-205ENST00000453689 TTC7AQ9ULT0 858 aaPredicted RBP14.79□□□□□ -0.04
VPS16-205ENST00000453689 SNX11Q9Y5W9 270 aa14.79□□□□□ -0.04
VPS16-205ENST00000453689 TCRBV7S2A1N4TA0A589 114 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 TSPAN11A1L157 253 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 TTC24A2A3L6 582 aaPredicted RBP14.78□□□□□ -0.04
VPS16-205ENST00000453689 HACD1B0YJ81 288 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 PRAMEF26H0Y7S4 382 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 PGRMC1O00264 195 aaKnown RBP14.78□□□□□ -0.04
VPS16-205ENST00000453689 AREL1O15033 823 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 SLC31A1O15431 190 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 TSPAN6O43657 245 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 OPHN1O60890 802 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 CER1O95813 267 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 TIMP2P16035 220 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 CR2P20023 1033 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 CCNCP24863 283 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 HSPA9P38646 679 aaKnown RBP14.78□□□□□ -0.04
VPS16-205ENST00000453689 MMP13P45452 471 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 RPS21P63220 83 aaKnown RBP14.78□□□□□ -0.04
VPS16-205ENST00000453689 PPIDQ08752 370 aaKnown RBP14.78□□□□□ -0.04
VPS16-205ENST00000453689 XRCC4Q13426 336 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 FGL2Q14314 439 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 LONRF2Q1L5Z9 754 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 KIF19Q2TAC6 998 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 HLA-BQ31612 363 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 MARC1Q5VT66 337 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 IL27RAQ6UWB1 636 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 BBS5Q8N3I7 341 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 TEX26Q8N6G2 289 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 CCNYQ8ND76 341 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 ACTRT1Q8TDG2 376 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 HCAR2Q8TDS4 363 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 LRRN4Q8WUT4 740 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 MAML1Q92585 1016 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 FATE1Q969F0 183 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 MS4A14Q96JA4 679 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 FEM1CQ96JP0 617 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 QKIQ96PU8 341 aaKnown RBP eCLIP14.78□□□□□ -0.04
VPS16-205ENST00000453689 NAP1L3Q99457 506 aaPredicted RBP14.78□□□□□ -0.04
VPS16-205ENST00000453689 MYOCQ99972 504 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 MGME1Q9BQP7 344 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 FRMD8P1Q9BZ68 369 aaPredicted RBP14.78□□□□□ -0.04
VPS16-205ENST00000453689 GAREM1Q9H706 876 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 ATP13A3Q9H7F0 1226 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 FZD3Q9NPG1 666 aa14.78□□□□□ -0.04
VPS16-205ENST00000453689 NEMP1O14524 444 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 ZNF185O15231 689 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 ITIH2P19823 946 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 HNRNPA2B1P22626 353 aaKnown RBP14.77□□□□□ -0.05
VPS16-205ENST00000453689 SERPINA4P29622 427 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 CTSKP43235 329 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 C21orf59P57076 290 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 EIF3EP60228 445 aaKnown RBP14.77□□□□□ -0.05
VPS16-205ENST00000453689 MAXP61244 160 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 AP1S1P61966 158 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 BCL2L1Q07817 233 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 HNRNPDQ14103 355 aaKnown RBP14.77□□□□□ -0.05
VPS16-205ENST00000453689 SLC45A4Q5BKX6 768 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 BRAT1Q6PJG6 821 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 ZC3H18Q86VM9 953 aaKnown RBP14.77□□□□□ -0.05
VPS16-205ENST00000453689 ZSWIM9Q86XI8 627 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 CDKL3Q8IVW4 592 aaPredicted RBP14.77□□□□□ -0.05
VPS16-205ENST00000453689 CCDC13Q8IYE1 715 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 MFSD2AQ8NA29 543 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 TFB1MQ8WVM0 346 aaKnown RBP14.77□□□□□ -0.05
VPS16-205ENST00000453689 ECHDC3Q96DC8 303 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 NUDCD1Q96RS6 583 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 LGMNQ99538 433 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 SLC17A9Q9BYT1 436 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 NT5MQ9NPB1 228 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 SCUBE2Q9NQ36 999 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 CA5BQ9Y2D0 317 aa14.77□□□□□ -0.05
VPS16-205ENST00000453689 FNDC3AQ9Y2H6 1198 aaKnown RBP14.77□□□□□ -0.05
VPS16-205ENST00000453689 R3HDM2Q9Y2K5 976 aaKnown RBP14.77□□□□□ -0.05
VPS16-205ENST00000453689 IGLON5A6NGN9 336 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 UPK3BL1B0FP48 263 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 UPK3BL2E5RIL1 263 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 H7C0C1 242 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 MATN3O15232 486 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 ZNF189O75820 626 aaPredicted RBP14.76□□□□□ -0.05
VPS16-205ENST00000453689 PAK4O96013 591 aaPredicted RBP14.76□□□□□ -0.05
VPS16-205ENST00000453689 RBP3P10745 1247 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 CD59P13987 128 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 XPAP23025 273 aaPredicted RBP14.76□□□□□ -0.05
VPS16-205ENST00000453689 AKT2P31751 481 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 ATP5OP48047 213 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 SUOXP51687 545 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 AP1B1Q10567 949 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 STAT4Q14765 748 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 PRKD1Q15139 912 aaPredicted RBP14.76□□□□□ -0.05
VPS16-205ENST00000453689 SIX1Q15475 284 aaPredicted RBP14.76□□□□□ -0.05
VPS16-205ENST00000453689 UGP2Q16851 508 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 CFAP58Q5T655 872 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 IQCHQ86VS3 1027 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 TMEM145Q8NBT3 493 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 SKA1Q96BD8 255 aa14.76□□□□□ -0.05
VPS16-205ENST00000453689 FAM118BQ9BPY3 351 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms