RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 PDK2Q15119 407 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 NOMO1Q15155 1222 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 DUSP7Q16829 419 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 HADHQ16836 314 aaKnown RBP8.68□□□□□ -1.02
LSM5-208ENST00000450169 WDR44Q5JSH3 913 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 NPNTQ6UXI9 565 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 ADAMTSL2Q86TH1 951 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.68□□□□□ -1.02
LSM5-208ENST00000450169 UNC5BQ8IZJ1 945 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 LGI2Q8N0V4 545 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 CADM2Q8N3J6 435 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 AFAP1L2Q8N4X5 818 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 RHOXF1Q8NHV9 184 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 MAGEE2Q8TD90 523 aaPredicted RBP8.68□□□□□ -1.02
LSM5-208ENST00000450169 SLC45A3Q96JT2 553 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 SIGLEC10Q96LC7 697 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 CITED4Q96RK1 184 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 ZNF577Q9BSK1 485 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 MKRN2Q9H000 416 aaKnown RBP8.68□□□□□ -1.02
LSM5-208ENST00000450169 ING2Q9H160 280 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 SARDHQ9UL12 918 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 PTPRFP10586 1907 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 CENPXA8MT69 81 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 FADS2P1A8MWK0 482 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 FAM25AB3EWG3 89 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 FAM25CB3EWG5 89 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 FAM25GB3EWG6 89 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 G3V2L1 256 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 hCG_2039718K7EN88 272 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 KCNN4O15554 427 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 B4GALT4O60513 344 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 LRCH4O75427 683 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 PSMD10O75832 226 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 SEC24AO95486 1093 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 FOSP01100 380 aaPredicted RBP8.67□□□□□ -1.02
LSM5-208ENST00000450169 CAPN1P07384 714 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 ASNSP08243 561 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 SPNP16150 400 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 TFEBP19484 476 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 ACO1P21399 889 aaKnown RBP8.67□□□□□ -1.02
LSM5-208ENST00000450169 PSMA2P25787 234 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 PSMA4P25789 261 aaKnown RBP8.67□□□□□ -1.02
LSM5-208ENST00000450169 PTGS2P35354 604 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 ATP5OP48047 213 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 ADARB1P78563 741 aaKnown RBP8.67□□□□□ -1.02
LSM5-208ENST00000450169 GTF2BQ00403 316 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 INPP5AQ14642 412 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 CBX2Q14781 532 aaPredicted RBP8.67□□□□□ -1.02
LSM5-208ENST00000450169 ZNF181Q2M3W8 571 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 TBC1D10BQ4KMP7 808 aaPredicted RBP8.67□□□□□ -1.02
LSM5-208ENST00000450169 CATSPEREQ5SY80 951 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 AGAP6Q5VW22 663 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 STEAP3Q658P3 488 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 SLFN13Q68D06 897 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 REP15Q6BDI9 236 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 PMF1Q6P1K2 205 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 DPP8Q6V1X1 898 aaPredicted RBP8.67□□□□□ -1.02
LSM5-208ENST00000450169 PIGZQ86VD9 579 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 CMTR2Q8IYT2 770 aaKnown RBP8.67□□□□□ -1.02
LSM5-208ENST00000450169 FAM109AQ8N4B1 249 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 KCTD6Q8NC69 237 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 SHCBP1Q8NEM2 672 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 NDNFQ8TB73 568 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 PHF10Q8WUB8 498 aaKnown RBP8.67□□□□□ -1.02
LSM5-208ENST00000450169 STON2Q8WXE9 905 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 CDKL2Q92772 493 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 ZFYVE19Q96K21 471 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 FAM84AQ96KN4 292 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 MUS81Q96NY9 551 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 AGAP4Q96P64 663 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 LXNQ9BS40 222 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 GATA5Q9BWX5 397 aaPredicted RBP8.67□□□□□ -1.02
LSM5-208ENST00000450169 ADNPQ9H2P0 1102 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 SLA2Q9H6Q3 261 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 ATP13A2Q9NQ11 1180 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 TBC1D13Q9NVG8 400 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 GMIPQ9P107 970 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 ZMAT5Q9UDW3 170 aaKnown RBP8.67□□□□□ -1.02
LSM5-208ENST00000450169 VTI1BQ9UEU0 232 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 USP21Q9UK80 565 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 VPS9D1Q9Y2B5 631 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 PCDHB4Q9Y5E5 795 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 PMF1-BGLAPU3KQ54 211 aa8.67□□□□□ -1.02
LSM5-208ENST00000450169 IGLV3-22A0A075B6J6 115 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 IGKV6D-41A0A0C4DH26 115 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 H0YAE9 185 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 LZTS3O60299 673 aaPredicted RBP8.66□□□□□ -1.02
LSM5-208ENST00000450169 GABARAPO95166 117 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 JUNP05412 331 aaKnown RBP8.66□□□□□ -1.02
LSM5-208ENST00000450169 CCNYL3P0C7X3 344 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 CRHBPP24387 322 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 RBL1P28749 1068 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 AXLP30530 894 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 HADHAP40939 763 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 GRIA1P42261 906 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 MAGEA6P43360 314 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 CYP24A1Q07973 514 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 BNIP2Q12982 314 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 GEN1Q17RS7 908 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms