RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ACDQ96AP0 544 aa10.65□□□□□ -0.7
VIPAS39-203ENST00000448935 SAMD11Q96NU1 681 aa10.65□□□□□ -0.7
VIPAS39-203ENST00000448935 HTATIP2Q9BUP3 242 aa10.65□□□□□ -0.7
VIPAS39-203ENST00000448935 ADGRE3Q9BY15 652 aa10.65□□□□□ -0.7
VIPAS39-203ENST00000448935 TRIM55Q9BYV6 548 aa10.65□□□□□ -0.7
VIPAS39-203ENST00000448935 ALG13Q9NP73 1137 aaKnown RBP10.65□□□□□ -0.7
VIPAS39-203ENST00000448935 SIRPGQ9P1W8 387 aa10.65□□□□□ -0.7
VIPAS39-203ENST00000448935 KIAA1522Q9P206 1035 aaPredicted RBP10.65□□□□□ -0.7
VIPAS39-203ENST00000448935 CFAP97Q9P2B7 532 aa10.65□□□□□ -0.7
VIPAS39-203ENST00000448935 VPS28Q9UK41 221 aa10.65□□□□□ -0.7
VIPAS39-203ENST00000448935 ARHGAP26Q9UNA1 814 aa10.65□□□□□ -0.7
VIPAS39-203ENST00000448935 MTO1Q9Y2Z2 717 aaKnown RBP10.65□□□□□ -0.7
VIPAS39-203ENST00000448935 A0A096LPK6 155 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 A0A1W2PRU2 124 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 CCDC78A2IDD5 438 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 MUSKO15146 869 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 CCL16O15467 120 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 PLIN3O60664 434 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 DCTN3O75935 186 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 ZNF16P17020 682 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 HOXB8P17481 243 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 CR2P20023 1033 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 CRABP2P29373 138 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 AVPR1AP37288 418 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 SCNN1BP51168 640 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 KPNA2P52292 529 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 SLC12A2P55011 1212 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 TMPRSS15P98073 1019 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 CCDC15Q0P6D6 951 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 MSLNQ13421 630 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 USP10Q14694 798 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 SETDB1Q15047 1291 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 CYTH1Q15438 398 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 N4BP2L1Q5TBK1 243 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 ZNF470Q6ECI4 717 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 RAPH1Q70E73 1250 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 OTOAQ7RTW8 1153 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 MFN1Q8IWA4 741 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 PPP1R14CQ8TAE6 165 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 SCG3Q8WXD2 468 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 C7orf26Q96N11 449 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 FEM1AQ9BSK4 669 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 C12orf65Q9H3J6 166 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 MFSD1Q9H3U5 465 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 NOD2Q9HC29 1040 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 SLCO1B3Q9NPD5 702 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 DNAAF2Q9NVR5 837 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 FBXO5Q9UKT4 447 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 PCDHB3Q9Y5E6 796 aa10.64□□□□□ -0.71
VIPAS39-203ENST00000448935 LINC01553A4QN01 128 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 HIDE1A8MVS5 230 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 LEFTY2O00292 366 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 TMCC1O94876 653 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 AHSGP02765 367 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 C2P06681 752 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 STMN1P16949 149 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 BGNP21810 368 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 GRK2P25098 689 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 ARNTP27540 789 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 MAPK8P45983 427 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 CLCN5P51795 746 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 PRKAA2P54646 552 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 ARF5P84085 180 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 POU4F1Q01851 419 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 ACVR1Q04771 509 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 SLC20A2Q08357 652 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 GRM3Q14832 879 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 GPR158Q5T848 1215 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 CGB2Q6NT52 195 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 RDH11Q8TC12 318 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 TSPAN17Q96FV3 270 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 ATXN7L3BQ96GX2 97 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 TRIB3Q96RU7 358 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 TDRD1Q9BXT4 1180 aaKnown RBP10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 TASP1Q9H6P5 420 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 MAN1C1Q9NR34 630 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 HACD3Q9P035 362 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 SLC2A6Q9UGQ3 507 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 SLC39A10Q9ULF5 831 aa10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 CORO1CQ9ULV4 474 aaPredicted RBP10.63□□□□□ -0.71
VIPAS39-203ENST00000448935 A0A087X1B8 175 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 FAM95CA0A1B0GW59 222 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 LCHNA4D1U4 455 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 GOLGA8TH3BQL2 631 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 TK2O00142 265 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 ZNF197O14709 1029 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 LDB2O43679 373 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 H2AFYO75367 372 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 RPP40O75818 363 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 ZMPSTE24O75844 475 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 PROCP04070 461 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 POU2F2P09086 479 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 GLDCP23378 1020 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CSKP41240 450 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 SLC1A2P43004 574 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 LEPRP48357 1165 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 RAB10P61026 200 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 RHOAP61586 193 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 AP1S1P61966 158 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms