RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 KHNYNO15037 678 aaKnown RBP14.19□□□□□ -0.14
SSBP3-208ENST00000444533 BCAT2O15382 392 aaPredicted RBP14.19□□□□□ -0.14
SSBP3-208ENST00000444533 MAGEC1O60732 1142 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 GJB3O75712 270 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 TM7SF2O76062 418 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 CFIP05156 583 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 ELFN1P0C7U0 828 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 NFKB1P19838 968 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 PAFAH1B1P43034 410 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 AFF3P51826 1226 aaKnown RBP14.19□□□□□ -0.14
SSBP3-208ENST00000444533 GEMP55040 296 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 WASHC5Q12768 1159 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 TRAF2Q12933 501 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 MPP3Q13368 585 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 SNX1Q13596 522 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 STAT4Q14765 748 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 PCSK7Q16549 785 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 P3H1Q32P28 736 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 ANKRD20A2Q5SQ80 823 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 ANKRD20A1Q5TYW2 823 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 ANKRD20A3Q5VUR7 823 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 CNTD1Q8N815 330 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 FAM71DQ8N9W8 422 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 SLC35B2Q8TB61 432 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 ARRDC2Q8TBH0 407 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 C1orf54Q8WWF1 131 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 ATG4AQ8WYN0 398 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 DNASE2BQ8WZ79 361 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 SERAC1Q96JX3 654 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 SPATA13Q96N96 652 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 FCRL5Q96RD9 977 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 SRPK1Q96SB4 655 aaKnown RBP14.19□□□□□ -0.14
SSBP3-208ENST00000444533 TMEM121Q9BTD3 319 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 TDRD1Q9BXT4 1180 aaKnown RBP14.19□□□□□ -0.14
SSBP3-208ENST00000444533 GBA3Q9H227 469 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 KCTD5Q9NXV2 234 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 FEZ2Q9UHY8 353 aaPredicted RBP14.19□□□□□ -0.14
SSBP3-208ENST00000444533 PILRBQ9UKJ0 227 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 CHKBQ9Y259 395 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 SAR1BQ9Y6B6 198 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 SPAG17Q6Q759 2223 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 C5orf60A6NFR6 353 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 PRAMEF26H0Y7S4 382 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 RIOK3O14730 519 aaKnown RBP14.18□□□□□ -0.14
SSBP3-208ENST00000444533 AREL1O15033 823 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 PSMD3O43242 534 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 LZTS3O60299 673 aaPredicted RBP14.18□□□□□ -0.14
SSBP3-208ENST00000444533 PMPCBO75439 489 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 IFNB1P01574 187 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 ITGAVP06756 1048 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 SYPP08247 313 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 PRLRP16471 622 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 HNRNPA2B1P22626 353 aaKnown RBP14.18□□□□□ -0.14
SSBP3-208ENST00000444533 MAOBP27338 520 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 PLA2G5P39877 138 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 ABL2P42684 1182 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 GRIA4P48058 902 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 ATXN3P54252 364 aaPredicted RBP14.18□□□□□ -0.14
SSBP3-208ENST00000444533 C21orf59P57076 290 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 TAS2R38P59533 333 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 RACK1P63244 317 aaKnown RBP14.18□□□□□ -0.14
SSBP3-208ENST00000444533 SKOR1P84550 965 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 CDK18Q07002 472 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 NIPAL4Q0D2K0 466 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 LRRC73Q5JTD7 316 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 C4orf22Q6V702 233 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 RASGEF1CQ8N431 466 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 LPCAT1Q8NF37 534 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 FAM174AQ8TBP5 190 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 ACTRT1Q8TDG2 376 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 WRAP53Q9BUR4 548 aaKnown RBP14.18□□□□□ -0.14
SSBP3-208ENST00000444533 MLPHQ9BV36 600 aaPredicted RBP14.18□□□□□ -0.14
SSBP3-208ENST00000444533 SLC17A9Q9BYT1 436 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 C10orf88Q9H8K7 445 aa14.18□□□□□ -0.14
SSBP3-208ENST00000444533 TTC7AQ9ULT0 858 aaPredicted RBP14.18□□□□□ -0.14
SSBP3-208ENST00000444533 R3HDM2Q9Y2K5 976 aaKnown RBP14.18□□□□□ -0.14
SSBP3-208ENST00000444533 ATXN2Q99700 1313 aaKnown RBP14.17□□□□□ -0.14
SSBP3-208ENST00000444533 ABCA7Q8IZY2 2146 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 IGLON5A6NGN9 336 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 E7EVH7 732 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 SLC31A1O15431 190 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 LATO43561 262 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 GCATO75600 419 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 TUBB4AP04350 444 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 IGHV4-34P06331 123 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 VIPR1P32241 457 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 MMP12P39900 470 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 LMAN1P49257 510 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 ETF1P62495 437 aaKnown RBP14.17□□□□□ -0.14
SSBP3-208ENST00000444533 PPP2CBP62714 309 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 PPP2CAP67775 309 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 SPEM2Q0P670 501 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 PARP6Q2NL67 630 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 TMEM52BQ4KMG9 183 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 TRIM61Q5EBN2 209 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 NAPEPLDQ6IQ20 393 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 DRICH1Q6PGQ1 229 aaPredicted RBP14.17□□□□□ -0.14
SSBP3-208ENST00000444533 ASCL5Q7RTU5 278 aa14.17□□□□□ -0.14
SSBP3-208ENST00000444533 KDELC2Q7Z4H8 507 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms