RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 FGGP02679 453 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 PDHA1P08559 390 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 CA4P22748 312 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 CD68P34810 354 aaPredicted RBP12.41□□□□□ -0.42
USP1-203ENST00000442679 SEMG2Q02383 582 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 SGCGQ13326 291 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 TMEM52BQ4KMG9 183 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 TMEM259Q4ZIN3 620 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 TRIM61Q5EBN2 209 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 TCEAL6Q6IPX3 200 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 ZSCAN30Q86W11 494 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 CXorf40AQ8TE69 158 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 SPOCK2Q92563 424 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 TCEAL3Q969E4 200 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 SERAC1Q96JX3 654 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 PBKQ96KB5 322 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 WRAP53Q9BUR4 548 aaKnown RBP12.41□□□□□ -0.42
USP1-203ENST00000442679 SLC17A9Q9BYT1 436 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 FRMD8P1Q9BZ68 369 aaPredicted RBP12.41□□□□□ -0.42
USP1-203ENST00000442679 USP29Q9HBJ7 922 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 PHTF1Q9UMS5 762 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 SLC6A14Q9UN76 642 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 DMTF1Q9Y222 760 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 CHKBQ9Y259 395 aa12.41□□□□□ -0.42
USP1-203ENST00000442679 THADAQ6YHU6 1953 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 A8MX80 341 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 PRAMEF26H0Y7S4 382 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 WNT9AO14904 365 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 FZD6O60353 706 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 FOXD2O60548 495 aaPredicted RBP12.4□□□□□ -0.42
USP1-203ENST00000442679 ZNF189O75820 626 aaPredicted RBP12.4□□□□□ -0.42
USP1-203ENST00000442679 PAK4O96013 591 aaPredicted RBP12.4□□□□□ -0.42
USP1-203ENST00000442679 ATP1A1P05023 1023 aaKnown RBP12.4□□□□□ -0.42
USP1-203ENST00000442679 PRLRP16471 622 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 NFKB1P19838 968 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 NFKBIAP25963 317 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 MMP12P39900 470 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 LIG3P49916 1009 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 AFF3P51826 1226 aaKnown RBP12.4□□□□□ -0.42
USP1-203ENST00000442679 EPHB1P54762 984 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 GNG11P61952 73 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 RACK1P63244 317 aaKnown RBP12.4□□□□□ -0.42
USP1-203ENST00000442679 IRX4P78413 519 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 LONRF2Q1L5Z9 754 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 SLC23A3Q6PIS1 610 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 KIAA2013Q8IYS2 634 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 NDUFAF2Q8N183 169 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 C12orf50Q8NA57 414 aaPredicted RBP12.4□□□□□ -0.42
USP1-203ENST00000442679 SPATA22Q8NHS9 363 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 SLC35B2Q8TB61 432 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 PIH1D2Q8WWB5 315 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 MAIP1Q8WWC4 291 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 C1orf54Q8WWF1 131 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 ATG4AQ8WYN0 398 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 SLC6A18Q96N87 628 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 C1QTNF2Q9BXJ5 285 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 NUSAP1Q9BXS6 441 aaKnown RBP12.4□□□□□ -0.42
USP1-203ENST00000442679 TDRD1Q9BXT4 1180 aaKnown RBP12.4□□□□□ -0.42
USP1-203ENST00000442679 PCDH9Q9HC56 1237 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 AASDHPPTQ9NRN7 309 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 DNPEPQ9ULA0 475 aa12.4□□□□□ -0.42
USP1-203ENST00000442679 F5H423 210 aaPredicted RBP12.39□□□□□ -0.43
USP1-203ENST00000442679 LIASO43766 372 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 PMPCBO75439 489 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 MT-CYBP00156 380 aaPredicted RBP12.39□□□□□ -0.43
USP1-203ENST00000442679 PRLP01236 227 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 CTPS1P17812 591 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 AKT2P31751 481 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 CSNK1EP49674 416 aaKnown RBP12.39□□□□□ -0.43
USP1-203ENST00000442679 RPL26P61254 145 aaKnown RBP12.39□□□□□ -0.43
USP1-203ENST00000442679 FGL2Q14314 439 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 STAT4Q14765 748 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 TEAD4Q15561 434 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 ANKRD20A2Q5SQ80 823 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 ANKRD20A1Q5TYW2 823 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 ANKRD20A3Q5VUR7 823 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 ITPRIPL1Q6GPH6 555 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 NAPEPLDQ6IQ20 393 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 PRR23CQ6ZRP0 262 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 USP45Q70EL2 814 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 DPPA4Q7L190 304 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 KDELC2Q7Z4H8 507 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 C17orf53Q8N3J3 647 aaPredicted RBP12.39□□□□□ -0.43
USP1-203ENST00000442679 PIP4P2Q8N4L2 257 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 FAM71DQ8N9W8 422 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 LPCAT1Q8NF37 534 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 ASB12Q8WXK4 309 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 TADA1Q96BN2 335 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 SCRN2Q96FV2 425 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 FCRL5Q96RD9 977 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 TMEM121Q9BTD3 319 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 ADGRE3Q9BY15 652 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 CAPN10Q9HC96 672 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 FZD3Q9NPG1 666 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 FSCN3Q9NQT6 498 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 KCND1Q9NSA2 647 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 UBP1Q9NZI7 540 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 B4GALT6Q9UBX8 382 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 RSPH14Q9UHP6 348 aa12.39□□□□□ -0.43
USP1-203ENST00000442679 RPL26L1Q9UNX3 145 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms