RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MSH2P43246 934 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 SEC24CP53992 1094 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 MAGOHP61326 146 aaKnown RBP8.15□□□□□ -1.1
CCDC39-201ENST00000442201 CYTH1Q15438 398 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 PLEKHG6Q3KR16 790 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 LY6G5CQ5SRR4 150 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 STEAP4Q687X5 459 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 DENND5AQ6IQ26 1287 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 SYCE2Q6PIF2 218 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 CYS1Q717R9 158 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 CTAGE3PQ8IX95 158 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 ADGRG2Q8IZP9 1017 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 APCDD1Q8J025 514 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 CCDC63Q8NA47 563 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 TADA1Q96BN2 335 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 TLCD1Q96CP7 247 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 ASB16Q96NS5 453 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 PAFAH2Q99487 392 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 FAM167BQ9BTA0 163 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 PLAC1Q9HBJ0 212 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 ARNT2Q9HBZ2 717 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 PSMC3IPQ9P2W1 217 aaPredicted RBP8.15□□□□□ -1.1
CCDC39-201ENST00000442201 TBK1Q9UHD2 729 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 NYNRINQ9P2P1 1898 aaKnown RBP8.15□□□□□ -1.11
CCDC39-201ENST00000442201 TTC24A2A3L6 582 aaPredicted RBP8.15□□□□□ -1.11
CCDC39-201ENST00000442201 GMNCA6NCL1 334 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 TROVE2P10155 538 aaKnown RBP eCLIP8.15□□□□□ -1.11
CCDC39-201ENST00000442201 TYRP14679 529 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 ACADSP16219 412 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 NR1D1P20393 614 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 PRKCHP24723 683 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 CD70P32970 193 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 VIPR2P41587 438 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 PLK1P53350 603 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 LSAMPQ13449 338 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 TAF11Q15544 211 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 FAM78AQ5JUQ0 283 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 SPANXN3Q5MJ09 141 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 SH2D4BQ5SQS7 431 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 ZNF554Q86TJ5 538 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 LRRC6Q86X45 466 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 ARFGAP2Q8N6H7 521 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 FAM136AQ96C01 138 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 EXOC2Q96KP1 924 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 ABCB8Q9NUT2 735 aa8.15□□□□□ -1.11
CCDC39-201ENST00000442201 MYO18AQ92614 2054 aaKnown RBP8.15□□□□□ -1.11
CCDC39-201ENST00000442201 FAM237BA0A1B0GVD1 139 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 HTR3EA5X5Y0 456 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 INSIG1O15503 277 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 PIAS1O75925 651 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 CD160O95971 181 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 EPOP01588 193 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 INHBAP08476 426 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 FUT4P22083 530 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 GCAP28676 217 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 HPDP32754 393 aaPredicted RBP8.14□□□□□ -1.11
CCDC39-201ENST00000442201 CHRNA4P43681 627 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 EFTUD2Q15029 972 aaKnown RBP eCLIP8.14□□□□□ -1.11
CCDC39-201ENST00000442201 TMED2Q15363 201 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 SLC14A2Q15849 920 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 TNFAIP8L3Q5GJ75 292 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 PCID2Q5JVF3 399 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 ATAT1Q5SQI0 421 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 CES5AQ6NT32 575 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 TRMT10BQ6PF06 316 aaKnown RBP8.14□□□□□ -1.11
CCDC39-201ENST00000442201 TAOK1Q7L7X3 1001 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 METTL3Q86U44 580 aaKnown RBP8.14□□□□□ -1.11
CCDC39-201ENST00000442201 TMEM135Q86UB9 458 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 PEX5LQ8IYB4 626 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 SLC25A41Q8N5S1 370 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 PPM1NQ8N819 430 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 BPIFB1Q8TDL5 484 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 CDKL2Q92772 493 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 TTC17Q96AE7 1141 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 ZNF669Q96BR6 464 aaPredicted RBP8.14□□□□□ -1.11
CCDC39-201ENST00000442201 FEM1CQ96JP0 617 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 LRRC3BQ96PB8 259 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 SCUBE2Q9NQ36 999 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 DUS2Q9NX74 493 aaKnown RBP8.14□□□□□ -1.11
CCDC39-201ENST00000442201 EURLQ9NYK6 297 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 MOCS1Q9NZB8 636 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 MARK1Q9P0L2 795 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 CDH22Q9UJ99 828 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 SOX13Q9UN79 622 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 USP1O94782 785 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 ALDH1A2O94788 518 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 CR2P20023 1033 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 HLA-FP30511 346 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 RGRP47804 291 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 RHOAP61586 193 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 CDK18Q07002 472 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 NR1H3Q13133 447 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 ADAM15Q13444 863 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 CAMK2BQ13554 666 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 IHHQ14623 411 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 POU6F1Q14863 301 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 SLC1A5Q15758 541 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 PITRM1Q5JRX3 1037 aa8.14□□□□□ -1.11
CCDC39-201ENST00000442201 PPHLN1Q8NEY8 458 aaKnown RBP8.14□□□□□ -1.11
CCDC39-201ENST00000442201 CFAP61Q8NHU2 1237 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms