RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 CDC25CP30307 473 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 CA8P35219 290 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 AVPR1AP37288 418 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 NUMBP49757 651 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 RASSF2P50749 326 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 SCNN1BP51168 640 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 SLC12A2P55011 1212 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 ZXDBP98169 803 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 CYP4F8P98187 520 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 ZBTB16Q05516 673 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 INO80DQ53TQ3 878 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 RALGPS1Q5JS13 557 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 LRRC8EQ6NSJ5 796 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 CYB5D1Q6P9G0 228 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 HTR3DQ70Z44 454 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 PTAR1Q7Z6K3 402 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 TBC1D1Q86TI0 1168 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 HS6ST3Q8IZP7 471 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 TNS4Q8IZW8 715 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 CARNMT1Q8N4J0 409 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 GPATCH11Q8N954 259 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 DCAF4L2Q8NA75 395 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 KREMEN2Q8NCW0 462 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 SP7Q8TDD2 431 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 ALG14Q96F25 216 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 TSPAN17Q96FV3 270 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 GPR78Q96P69 363 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 OMDQ99983 421 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 TUBB6Q9BUF5 446 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 OXSMQ9NWU1 459 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 DNMT3BQ9UBC3 853 aaKnown RBP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 LHX3Q9UBR4 397 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 LNPEPQ9UIQ6 1025 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 CORO1CQ9ULV4 474 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-202ENST00000439724 LZTS1Q9Y250 596 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 KCTD3Q9Y597 815 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 IRAK3Q9Y616 596 aa11.84□□□□□ -0.51
SMAD3-202ENST00000439724 MTCL1Q9Y4B5 1905 aaKnown RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 C2orf71A6NGG8 1288 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 TK2O00142 265 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 FCHO1O14526 889 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 SNAP91O60641 907 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 CRTAMO95727 393 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 S1PR4O95977 384 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 PRLP01236 227 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 HOXB8P17481 243 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 MZF1P28698 734 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 ARRB2P32121 409 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 ZNF140P52738 457 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 AQP5P55064 265 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 KCNJ2P63252 427 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 ELF3P78545 371 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 KRT72Q14CN4 511 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 TAF1AQ15573 450 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 ZNF789Q5FWF6 425 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 FSCBQ5H9T9 825 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 MPP7Q5T2T1 576 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 RBM20Q5T481 1227 aaKnown RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 TMC7Q7Z402 723 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 ELMOD1Q8N336 334 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 FSTL5Q8N475 847 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 OR6P1Q8NGX9 317 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 SCG3Q8WXD2 468 aaKnown RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 SLC7A6OSQ96CW6 309 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 DNAJC1Q96KC8 554 aaKnown RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 EXOC2Q96KP1 924 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 TBATAQ96M53 351 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 TMEM237Q96Q45 408 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 GCNAQ96QF7 691 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 OLFM1Q99784 485 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 FEM1AQ9BSK4 669 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 TMEM106CQ9BVX2 250 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 NLE1Q9NVX2 485 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 DNAJC28Q9NX36 388 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 MARCH4Q9P2E8 410 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 MARCOQ9UEW3 520 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 RUVBL2Q9Y230 463 aaKnown RBP11.83□□□□□ -0.52
SMAD3-202ENST00000439724 ARL5AQ9Y689 179 aa11.83□□□□□ -0.52
SMAD3-202ENST00000439724 KIAA0100Q14667 2235 aaKnown RBP11.82□□□□□ -0.52
SMAD3-202ENST00000439724 ALPK3Q96L96 1907 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 TRAV19A0A0A6YYK7 116 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 CCDC162PA2VCL2 907 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 MGRN1O60291 552 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 CCDC22O60826 627 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 WISP3O95389 354 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-202ENST00000439724 CBX6O95503 412 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 GLP2RO95838 553 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 GOT2P00505 430 aaKnown RBP11.82□□□□□ -0.52
SMAD3-202ENST00000439724 CKMP06732 381 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 KITP10721 976 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 SLC26A3P40879 764 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 CSKP41240 450 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 FPGSQ05932 587 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 ASPHQ12797 758 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 DLG1Q12959 904 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 CDH18Q13634 790 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 ZNF460Q14592 562 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 TYSND1Q2T9J0 566 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms