RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 TTLL3Q9Y4R7 772 aa24.19■■□□□ 1.46
CPNE1-217ENST00000439669 C3orf70A6NLC5 250 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-217ENST00000439669 APOL1O14791 398 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 HYAL3O43820 417 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-217ENST00000439669 LZTS3O60299 673 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-217ENST00000439669 TRIM16O95361 564 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 SPINK2P20155 84 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 CCNCP24863 283 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 LIG3P49916 1009 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 SLC10A2Q12908 348 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-217ENST00000439669 PDE1CQ14123 709 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-217ENST00000439669 ZNF542PQ5EBM4 170 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 RALGPS1Q5JS13 557 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 VSIG1Q86XK7 387 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 RFX6Q8HWS3 928 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 TEX26Q8N6G2 289 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 PNPLA1Q8N8W4 532 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 CCNYQ8ND76 341 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 MAML1Q92585 1016 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 CENPTQ96BT3 561 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 TSGA13Q96PP4 275 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 GPR27Q9NS67 375 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 HAUS2Q9NVX0 235 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 DNAJC28Q9NX36 388 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 DTLQ9NZJ0 730 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 HEY1Q9Y5J3 304 aa24.18■■□□□ 1.46
CPNE1-217ENST00000439669 A0A0A6YYK5 440 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-217ENST00000439669 MATN3O15232 486 aa24.17■■□□□ 1.46
CPNE1-217ENST00000439669 TNFSF14O43557 240 aa24.17■■□□□ 1.46
CPNE1-217ENST00000439669 CPP00450 1065 aa24.17■■□□□ 1.46
CPNE1-217ENST00000439669 ATXN1LP0C7T5 689 aaKnown RBP24.17■■□□□ 1.46
CPNE1-217ENST00000439669 PFN3P60673 137 aa24.17■■□□□ 1.46
CPNE1-217ENST00000439669 TRAF2Q12933 501 aa24.17■■□□□ 1.46
CPNE1-217ENST00000439669 IRF4Q15306 451 aa24.17■■□□□ 1.46
CPNE1-217ENST00000439669 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.17■■□□□ 1.46
CPNE1-217ENST00000439669 PLD5Q8N7P1 536 aa24.17■■□□□ 1.46
CPNE1-217ENST00000439669 TP53I13Q8NBR0 393 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-217ENST00000439669 SPC24Q8NBT2 197 aa24.17■■□□□ 1.46
CPNE1-217ENST00000439669 HDAC11Q96DB2 347 aa24.17■■□□□ 1.46
CPNE1-217ENST00000439669 SEMA3CQ99985 751 aa24.17■■□□□ 1.46
CPNE1-217ENST00000439669 POLR1EQ9GZS1 481 aaKnown RBP24.17■■□□□ 1.46
CPNE1-217ENST00000439669 MBNL1Q9NR56 388 aaKnown RBP24.17■■□□□ 1.46
CPNE1-217ENST00000439669 RBM22Q9NW64 420 aaKnown RBP eCLIP24.17■■□□□ 1.461e-6■■□□□ 12.7
CPNE1-217ENST00000439669 ALG6Q9Y672 507 aa24.17■■□□□ 1.46
CPNE1-217ENST00000439669 A0A1W2PQ67 120 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 HTRA2O43464 458 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-217ENST00000439669 PSTPIP1O43586 416 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 THOP1P52888 689 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 DYNLT1P63172 113 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 RALGDSQ12967 914 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 FZD2Q14332 565 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 LRRC14Q15048 493 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 CCDC157Q569K6 752 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 SLC9A4Q6AI14 798 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 RAD9BQ6WBX8 426 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 DPPA4Q7L190 304 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 SLCO6A1Q86UG4 719 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 PARGQ86W56 976 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 CCDC13Q8IYE1 715 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 CHCHD4Q8N4Q1 142 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 CNDP2Q96KP4 475 aaKnown RBP24.16■■□□□ 1.46
CPNE1-217ENST00000439669 SCNM1Q9BWG6 230 aa24.16■■□□□ 1.46
CPNE1-217ENST00000439669 SPTY2D1-AS1A0A0U1RR47 76 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 A8MX80 341 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 LDOC1O95751 146 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-217ENST00000439669 ELFN1P0C7U0 828 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 CCNB1P14635 433 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 ZFXP17010 805 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-217ENST00000439669 CDC25BP30305 580 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 ARMC12Q5T9G4 340 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 C11orf63Q6NUN7 778 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 MFSD7Q6UXD7 560 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 KANSL1Q7Z3B3 1105 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 FATE1Q969F0 183 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 IFT43Q96FT9 208 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 CNTNAP3BQ96NU0 1288 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 BAG1Q99933 345 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-217ENST00000439669 CNTNAP3Q9BZ76 1288 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 B4GALT6Q9UBX8 382 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 WASF3Q9UPY6 502 aa24.15■■□□□ 1.46
CPNE1-217ENST00000439669 PIAS2O75928 621 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 PCCBP05166 539 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 DGKAP23743 735 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 NFKBIAP25963 317 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 NAP1L1P55209 391 aaKnown RBP24.14■■□□□ 1.45
CPNE1-217ENST00000439669 DSC2Q02487 901 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 PTK2BQ14289 1009 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 WSCD2Q2TBF2 565 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 TPRG1LQ5T0D9 272 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 NPNTQ6UXI9 565 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 DAAM2Q86T65 1068 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 ACRBPQ8NEB7 543 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 ADAMTS14Q8WXS8 1223 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 LGMNQ99538 433 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 CAAP1Q9H8G2 361 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 UCKL1Q9NWZ5 548 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 TOR4AQ9NXH8 423 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 IMPACTQ9P2X3 320 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 RAI2Q9Y5P3 530 aa24.14■■□□□ 1.45
CPNE1-217ENST00000439669 CFAP69A5D8W1 941 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms