RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 DOLKQ9UPQ8 538 aa17.22■□□□□ 0.35
TRIM39-209ENST00000428728 ATP8A1Q9Y2Q0 1164 aa17.22■□□□□ 0.35
TRIM39-209ENST00000428728 OR1A2Q9Y585 309 aa17.22■□□□□ 0.35
TRIM39-209ENST00000428728 RAI2Q9Y5P3 530 aa17.22■□□□□ 0.35
TRIM39-209ENST00000428728 ARHGEF17Q96PE2 2063 aaPredicted RBP17.21■□□□□ 0.35
TRIM39-209ENST00000428728 EME2A4GXA9 379 aaPredicted RBP17.21■□□□□ 0.35
TRIM39-209ENST00000428728 TMEM191CA6NGB0 347 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 EIF4E1BA6NMX2 242 aaKnown RBP17.21■□□□□ 0.35
TRIM39-209ENST00000428728 SMTNL1A8MU46 457 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 EIF3CLB5ME19 914 aaKnown RBP17.21■□□□□ 0.35
TRIM39-209ENST00000428728 LMO7DNF2Z398 122 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 RIOK3O14730 519 aaKnown RBP17.21■□□□□ 0.35
TRIM39-209ENST00000428728 LZTS3O60299 673 aaPredicted RBP17.21■□□□□ 0.35
TRIM39-209ENST00000428728 SERPINA4P29622 427 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 LIG3P49916 1009 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 KLHL30Q0D2K2 578 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 ALG11Q2TAA5 492 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 C3orf38Q5JPI3 329 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 CAVIN1Q6NZI2 390 aaKnown RBP17.21■□□□□ 0.35
TRIM39-209ENST00000428728 ENPP7Q6UWV6 458 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 NYAP1Q6ZVC0 841 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 RD3Q7Z3Z2 195 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 SRLQ86TD4 932 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 GLMNQ92990 594 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 TBATAQ96M53 351 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 ZNF641Q96N77 438 aaPredicted RBP17.21■□□□□ 0.35
TRIM39-209ENST00000428728 TUBGCP5Q96RT8 1024 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 EIF3CQ99613 913 aaKnown RBP17.21■□□□□ 0.35
TRIM39-209ENST00000428728 SIRPGQ9P1W8 387 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 SCINQ9Y6U3 715 aa17.21■□□□□ 0.35
TRIM39-209ENST00000428728 SCN8AQ9UQD0 1980 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 DDX3XO00571 662 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRIM39-209ENST00000428728 TOR1BO14657 336 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 CASC3O15234 703 aaKnown RBP17.2■□□□□ 0.34
TRIM39-209ENST00000428728 LRCH4O75427 683 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 SKILP12757 684 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 CTSEP14091 401 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 RPIAP49247 311 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 PCBP4P57723 403 aaKnown RBP17.2■□□□□ 0.34
TRIM39-209ENST00000428728 INPP5AQ14642 412 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 NFATC4Q14934 902 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 ISXQ2M1V0 245 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 SMTNL2Q2TAL5 461 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 AFMIDQ63HM1 303 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 SPACA3Q8IXA5 215 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 TP53INP2Q8IXH6 220 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 KYQ8NBH2 561 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 PCDH19Q8TAB3 1148 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 HCAR2Q8TDS4 363 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 NAT6Q93015 286 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 ATXN7L3BQ96GX2 97 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 APOOQ9BUR5 198 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 PRORYQ9H606 182 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 POLR1BQ9H9Y6 1135 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 AIPL1Q9NZN9 384 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 GULP1Q9UBP9 304 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 KLQ9UEF7 1012 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 SATB2Q9UPW6 733 aa17.2■□□□□ 0.34
TRIM39-209ENST00000428728 A0A1W2PQC6 194 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 YY2O15391 372 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 RASGRP1O95267 797 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 GZMAP12544 262 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 HTR1BP28222 390 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 PRKCIP41743 596 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 LSSP48449 732 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 ZNF165P49910 485 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 PEX5P50542 639 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 BLKP51451 505 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 HK3P52790 923 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 TLE3Q04726 772 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 BCL2L1Q07817 233 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 IL10RBQ08334 325 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 RALGDSQ12967 914 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 TDRD12Q587J7 1177 aaKnown RBP17.19■□□□□ 0.34
TRIM39-209ENST00000428728 ESRP1Q6NXG1 681 aaKnown RBP17.19■□□□□ 0.34
TRIM39-209ENST00000428728 RBM44Q6ZP01 1051 aaKnown RBP17.19■□□□□ 0.34
TRIM39-209ENST00000428728 FSTL5Q8N475 847 aaPredicted RBP17.19■□□□□ 0.34
TRIM39-209ENST00000428728 ZNF248Q8NDW4 579 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 FNIP1Q8TF40 1166 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 PDXPQ96GD0 296 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 ZNF578Q96N58 590 aaPredicted RBP17.19■□□□□ 0.34
TRIM39-209ENST00000428728 NAP1L5Q96NT1 182 aaPredicted RBP17.19■□□□□ 0.34
TRIM39-209ENST00000428728 UBL7Q96S82 380 aaPredicted RBP17.19■□□□□ 0.34
TRIM39-209ENST00000428728 CCDC3Q9BQI4 270 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 CWC15Q9P013 229 aaKnown RBP17.19■□□□□ 0.34
TRIM39-209ENST00000428728 PADI4Q9UM07 663 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 ENTPD2Q9Y5L3 495 aa17.19■□□□□ 0.34
TRIM39-209ENST00000428728 ZFC3H1O60293 1989 aaKnown RBP17.19■□□□□ 0.34
TRIM39-209ENST00000428728 A0A1B0GTH6 734 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 TMEM110-MUSTN1A8MSY1 372 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 A8MX80 341 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 SERPINC1P01008 464 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 ALPIP09923 528 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 ELFN1P0C7U0 828 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 TCF4P15884 667 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 CSNK1DP48730 415 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 SCNN1BP51168 640 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 SRP54P61011 504 aaKnown RBP17.18■□□□□ 0.34
TRIM39-209ENST00000428728 MTM1Q13496 603 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 DPYSQ14117 519 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms