RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 RNASEH2AO75792 299 aaKnown RBP7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 ADH1BP00325 375 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 PDGFBP01127 241 aaPredicted RBP7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 DNTTP04053 509 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 PRKCGP05129 697 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 DCNP07585 359 aaKnown RBP7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 PIRTP0C851 137 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 MLNP12872 115 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 ALADP13716 330 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 TPH1P17752 444 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 MGAT1P26572 445 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 SLC8A1P32418 973 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 ABL2P42684 1182 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 DGKEP52429 567 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 METAP1P53582 386 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 RPS14P62263 151 aaKnown RBP7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 CRADDP78560 199 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 SATB1Q01826 763 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 PDIA2Q13087 525 aaKnown RBP7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 POU6F1Q14863 301 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 CRY1Q16526 586 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 QPCTQ16769 361 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 CCDC38Q502W7 563 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 HP1BP3Q5SSJ5 553 aaPredicted RBP7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 ANO7Q6IWH7 933 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 ERAP2Q6P179 960 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 LRRC8BQ6P9F7 803 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 RANBP10Q6VN20 620 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 CAND1Q86VP6 1230 aaKnown RBP7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 NDUFAF2Q8N183 169 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 PGBD3Q8N328 593 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 EIF1ADQ8N9N8 165 aaKnown RBP7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 TMIEQ8NEW7 156 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 PPHLN1Q8NEY8 458 aaKnown RBP7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 TSTD1Q8NFU3 115 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 BLOC1S5Q8TDH9 187 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 HMGB4Q8WW32 186 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 ECHDC3Q96DC8 303 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 STAMBPL1Q96FJ0 436 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 CFAP36Q96G28 342 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 HHIPQ96QV1 700 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 FAM129BQ96TA1 746 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 OSBPL6Q9BZF3 934 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 FOXP3Q9BZS1 431 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 SLC6A17Q9H1V8 727 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 CHRDQ9H2X0 955 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 POLMQ9NP87 494 aaPredicted RBP7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 SAYSD1Q9NPB0 183 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 POLR3BQ9NW08 1133 aaPredicted RBP7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 SYBUQ9NX95 663 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 DKK3Q9UBP4 350 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 SARDHQ9UL12 918 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 CHMP2BQ9UQN3 213 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 SIT1Q9Y3P8 196 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 C1orf232A0A0U1RR37 186 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 TSPAN11A1L157 253 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 CCDC78A2IDD5 438 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 TMEM221A6NGB7 291 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 NPIPB15A6NHN6 443 aaPredicted RBP7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 SDR42E2A6NKP2 422 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 CHURC1-FNTBB4DL54 471 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 M0R296 226 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 NEMP1O14524 444 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 FZD6O60353 706 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 ERLIN1O75477 346 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 ALDH1A2O94788 518 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 PRLP01236 227 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 ALPIP09923 528 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 FAM153BP0C7A2 387 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 MYBL2P10244 700 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 ACADMP11310 421 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 NDUFV2P19404 249 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 C5AR1P21730 350 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 NFKBIAP25963 317 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 P2RY2P41231 377 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 ELK3P41970 407 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 MAGEA3P43357 314 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 RPS9P46781 194 aaKnown RBP7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 NEK3P51956 506 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 COPAP53621 1224 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 POLR2LP62875 67 aaKnown RBP7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 FAM193AP78312 1265 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 SEMG2Q02383 582 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 DHX9Q08211 1270 aaKnown RBP7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 CNTN1Q12860 1018 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 FASTKD3Q14CZ7 662 aaKnown RBP7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 UGP2Q16851 508 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 FAM153CQ494X1 144 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 MAP9Q49MG5 647 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 MSS51Q4VC12 460 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 FNBP1LQ5T0N5 605 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 CERCAMQ5T4B2 595 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 CWF19L1Q69YN2 538 aaKnown RBP7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 DENND5AQ6IQ26 1287 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 FBXL19Q6PCT2 694 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 TMEM92Q6UXU6 159 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 CCNI2Q6ZMN8 369 aaPredicted RBP7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 ERN2Q76MJ5 926 aaKnown RBP7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 SYT13Q7L8C5 426 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 GLT6D1Q7Z4J2 308 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms