RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 NTAN1Q96AB6 310 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 GRAMD1AQ96CP6 724 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 CELF6Q96J87 481 aaKnown RBP16.69■□□□□ 0.26
VARS-216ENST00000428445 NCAPGQ9BPX3 1015 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 C1QTNF7Q9BXJ2 289 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 CPEB1Q9BZB8 566 aaKnown RBP16.69■□□□□ 0.26
VARS-216ENST00000428445 SUV39H2Q9H5I1 410 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 MRPL40Q9NQ50 206 aaKnown RBP16.69■□□□□ 0.26
VARS-216ENST00000428445 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.69■□□□□ 0.26
VARS-216ENST00000428445 CHMP5Q9NZZ3 219 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 DKK3Q9UBP4 350 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 FZD10Q9ULW2 581 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 SCN8AQ9UQD0 1980 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 ZSCAN5CA6NGD5 496 aaPredicted RBP16.68■□□□□ 0.26
VARS-216ENST00000428445 A8MX80 341 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 B8ZZF3 427 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 PLD2O14939 933 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 NOBOXO60393 691 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 UGT1A5P35504 534 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 NFATC4Q14934 902 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 ELOCQ15369 112 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 UGP2Q16851 508 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 CLEC16AQ2KHT3 1053 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 INO80DQ53TQ3 878 aaPredicted RBP16.68■□□□□ 0.26
VARS-216ENST00000428445 RAB11FIP2Q7L804 512 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 EXD3Q8N9H8 876 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 COL26A1Q96A83 441 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 PDXPQ96GD0 296 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 TBATAQ96M53 351 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 GFM1Q96RP9 751 aaKnown RBP16.68■□□□□ 0.26
VARS-216ENST00000428445 LRRN3Q9H3W5 708 aa16.68■□□□□ 0.26
VARS-216ENST00000428445 SEPT11Q9NVA2 429 aaKnown RBP16.68■□□□□ 0.26
VARS-216ENST00000428445 TCRBV5S1A1TA0A578 114 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 TMEM202A6NGA9 273 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 SIGLEC16A6NMB1 481 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 RASGRP1O95267 797 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 ITGA2BP08514 1039 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 ITIH1P19827 911 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 NSFP46459 744 aaKnown RBP16.67■□□□□ 0.26
VARS-216ENST00000428445 PEX5P50542 639 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 OGDHQ02218 1023 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 EFHC2Q5JST6 749 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 TMPRSS9Q7Z410 1059 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 DNAAF5Q86Y56 855 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 PELI3Q8N2H9 469 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 FSTL5Q8N475 847 aaPredicted RBP16.67■□□□□ 0.26
VARS-216ENST00000428445 CCL4L1Q8NHW4 92 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 SCG3Q8WXD2 468 aaKnown RBP16.67■□□□□ 0.26
VARS-216ENST00000428445 OR1E3Q8WZA6 343 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 CCDC97Q96F63 343 aaPredicted RBP16.67■□□□□ 0.26
VARS-216ENST00000428445 MED8Q96G25 268 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 NSMCE3Q96MG7 304 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 MCEEQ96PE7 176 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 CCNL2Q96S94 520 aaPredicted RBP16.67■□□□□ 0.26
VARS-216ENST00000428445 SLC39A8Q9C0K1 460 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 NUP62CLQ9H1M0 184 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 PDFQ9HBH1 243 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 UBA2Q9UBT2 640 aaPredicted RBP16.67■□□□□ 0.26
VARS-216ENST00000428445 KLQ9UEF7 1012 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 PISDQ9UG56 409 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 SIK3Q9Y2K2 1263 aa16.67■□□□□ 0.26
VARS-216ENST00000428445 ARHGEF17Q96PE2 2063 aaPredicted RBP16.66■□□□□ 0.26
VARS-216ENST00000428445 TTC24A2A3L6 582 aaPredicted RBP16.66■□□□□ 0.26
VARS-216ENST00000428445 D6RAR5 112 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 TNFP01375 233 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 ALPIP09923 528 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 ETV5P41161 510 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 STAT1P42224 750 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 BLKP51451 505 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 INHBCP55103 352 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 YBEYP58557 167 aaPredicted RBP16.66■□□□□ 0.26
VARS-216ENST00000428445 ELP6Q0PNE2 266 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 CA9Q16790 459 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 LINC00303Q3SY05 128 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 TRIM72Q6ZMU5 477 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 ARHGAP36Q6ZRI8 547 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 MON1BQ7L1V2 547 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 GKN2Q86XP6 184 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 PHF13Q86YI8 300 aaPredicted RBP16.66■□□□□ 0.26
VARS-216ENST00000428445 TSEN2Q8NCE0 465 aaKnown RBP16.66■□□□□ 0.26
VARS-216ENST00000428445 C3orf20Q8ND61 904 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 CASKIN2Q8WXE0 1202 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 LIN37Q96GY3 246 aaPredicted RBP16.66■□□□□ 0.26
VARS-216ENST00000428445 LRRC19Q9H756 370 aa16.66■□□□□ 0.26
VARS-216ENST00000428445 AHCTF1Q8WYP5 2266 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 TSPAN11A1L157 253 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 CAPN8A6NHC0 703 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 TMEM110-MUSTN1A8MSY1 372 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 WASH4PA8MWX3 477 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 TOR1BO14657 336 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 SLC28A2O43868 658 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 HTR1BP28222 390 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 PAPOLAP51003 745 aaKnown RBP16.65■□□□□ 0.26
VARS-216ENST00000428445 ZNF143P52747 638 aaPredicted RBP16.65■□□□□ 0.26
VARS-216ENST00000428445 GSCP56915 257 aaPredicted RBP16.65■□□□□ 0.26
VARS-216ENST00000428445 NFKB2Q00653 900 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 RALGDSQ12967 914 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 SYCP1Q15431 976 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 PARP15Q460N3 678 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 CDKAL1Q5VV42 579 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms