RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 KIAA0907Q7Z7F0 614 aaPredicted RBP15.29■□□□□ 0.04
ACTB-204ENST00000425660 SRLQ86TD4 932 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 NPAS3Q8IXF0 933 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.29■□□□□ 0.041e-24■■■□□ 16.3
ACTB-204ENST00000425660 STYXQ8WUJ0 223 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 CABS1Q96KC9 395 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 SLC2A11Q9BYW1 496 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 SLC13A1Q9BZW2 595 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 FAM107BQ9H098 131 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 C12orf65Q9H3J6 166 aaKnown RBP15.29■□□□□ 0.04
ACTB-204ENST00000425660 FBXO5Q9UKT4 447 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 MTO1Q9Y2Z2 717 aaKnown RBP15.29■□□□□ 0.04
ACTB-204ENST00000425660 ARL5AQ9Y689 179 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 WNT6Q9Y6F9 365 aa15.29■□□□□ 0.04
ACTB-204ENST00000425660 CRTAMO95727 393 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 PRKCGP05129 697 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 TYK2P29597 1187 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 ARSDP51689 593 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 ZNF140P52738 457 aaPredicted RBP15.28■□□□□ 0.04
ACTB-204ENST00000425660 CTBP1Q13363 440 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 TAF1AQ15573 450 aaPredicted RBP15.28■□□□□ 0.04
ACTB-204ENST00000425660 KYAT3Q6YP21 454 aaKnown RBP15.28■□□□□ 0.04
ACTB-204ENST00000425660 PIGWQ7Z7B1 504 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 CILP2Q8IUL8 1156 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 PPP2R3CQ969Q6 453 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 RMDN1Q96DB5 314 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 NSRP1Q9H0G5 558 aaKnown RBP15.28■□□□□ 0.04
ACTB-204ENST00000425660 DCDC2Q9UHG0 476 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 GGA2Q9UJY4 613 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 FBXO10Q9UK96 956 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 SPO11Q9Y5K1 396 aa15.28■□□□□ 0.04
ACTB-204ENST00000425660 NUP210Q8TEM1 1887 aaPredicted RBP15.27■□□□□ 0.04
ACTB-204ENST00000425660 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.27■□□□□ 0.04
ACTB-204ENST00000425660 TRAFD1O14545 582 aaPredicted RBP15.27■□□□□ 0.04
ACTB-204ENST00000425660 HTRA2O43464 458 aaPredicted RBP15.27■□□□□ 0.04
ACTB-204ENST00000425660 GLRA3O75311 464 aa15.27■□□□□ 0.04
ACTB-204ENST00000425660 PABPC1P11940 636 aaKnown RBP15.27■□□□□ 0.04
ACTB-204ENST00000425660 SRCP12931 536 aa15.27■□□□□ 0.04
ACTB-204ENST00000425660 LEPRP48357 1165 aaKnown RBP15.27■□□□□ 0.04
ACTB-204ENST00000425660 RPL26P61254 145 aaKnown RBP15.27■□□□□ 0.04
ACTB-204ENST00000425660 SULT2A1Q06520 285 aa15.27■□□□□ 0.04
ACTB-204ENST00000425660 DGKKQ5KSL6 1271 aa15.27■□□□□ 0.04
ACTB-204ENST00000425660 ATXN7L2Q5T6C5 722 aaPredicted RBP15.27■□□□□ 0.04
ACTB-204ENST00000425660 GKAP1Q5VSY0 366 aaPredicted RBP15.27■□□□□ 0.04
ACTB-204ENST00000425660 LPCAT1Q8NF37 534 aa15.27■□□□□ 0.04
ACTB-204ENST00000425660 OSCP1Q8WVF1 389 aa15.27■□□□□ 0.04
ACTB-204ENST00000425660 HDAC10Q969S8 669 aa15.27■□□□□ 0.04
ACTB-204ENST00000425660 VOPP1Q96AW1 172 aa15.27■□□□□ 0.04
ACTB-204ENST00000425660 ASB16Q96NS5 453 aa15.27■□□□□ 0.04
ACTB-204ENST00000425660 TM6SF2Q9BZW4 377 aa15.27■□□□□ 0.04
ACTB-204ENST00000425660 RPL26L1Q9UNX3 145 aaKnown RBP15.27■□□□□ 0.04
ACTB-204ENST00000425660 KCTD3Q9Y597 815 aa15.27■□□□□ 0.04
ACTB-204ENST00000425660 XIRP2A4UGR9 3374 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 SOCS5O75159 536 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 RPP40O75818 363 aaKnown RBP15.27■□□□□ 0.03
ACTB-204ENST00000425660 GLP2RO95838 553 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 MPOP05164 745 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 F7P08709 466 aaPredicted RBP15.27■□□□□ 0.03
ACTB-204ENST00000425660 PIRTP0C851 137 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 GRIA4P48058 902 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 SERPINB4P48594 390 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 PRAMEP78395 509 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 MPP1Q00013 466 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 ILF2Q12905 390 aaKnown RBP15.27■□□□□ 0.03
ACTB-204ENST00000425660 GRM3Q14832 879 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 FOXR1Q6PIV2 292 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 CMC1Q7Z7K0 106 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 GPR149Q86SP6 731 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 CLEC14AQ86T13 490 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 ADIPOR2Q86V24 386 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 ACVR1CQ8NER5 493 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 MDGA1Q8NFP4 955 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 OR2AP1Q8NGE2 309 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 GPR150Q8NGU9 434 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 LRRC8CQ8TDW0 803 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 ZNF75CPQ92670 426 aaPredicted RBP15.27■□□□□ 0.03
ACTB-204ENST00000425660 FGF13Q92913 245 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 RSPRY1Q96DX4 576 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 ATXN7L3BQ96GX2 97 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 DNAJC1Q96KC8 554 aaKnown RBP15.27■□□□□ 0.03
ACTB-204ENST00000425660 CEP44Q9C0F1 390 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 FGFR1OP2Q9NVK5 253 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 NLE1Q9NVX2 485 aaPredicted RBP15.27■□□□□ 0.03
ACTB-204ENST00000425660 GDE1Q9NZC3 331 aa15.27■□□□□ 0.03
ACTB-204ENST00000425660 KLF11O14901 512 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 AURKAO14965 403 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 PGLSO95336 258 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 IGSF6O95976 241 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 GSTA1P08263 222 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 FSHRP23945 695 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 CTSOP43234 321 aaPredicted RBP15.26■□□□□ 0.03
ACTB-204ENST00000425660 CD151P48509 253 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 DHCR24Q15392 516 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 ZKSCAN8Q15776 578 aaPredicted RBP15.26■□□□□ 0.03
ACTB-204ENST00000425660 DBN1Q16643 649 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 EML3Q32P44 896 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 PPM1JQ5JR12 505 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 FAM78AQ5JUQ0 283 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 CHRDL2Q6WN34 429 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 GLT6D1Q7Z4J2 308 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms