RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ARMC9Q7Z3E5 817 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 TLK2Q86UE8 772 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 TRABD2AQ86V40 505 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 KBTBD6Q86V97 674 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 P3H2Q8IVL5 708 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 KLHL7Q8IXQ5 586 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 FAM185AQ8N0U4 392 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 PQLC1Q8N2U9 271 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 PI4KAP1Q8N8J0 262 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 FAM133AQ8N9E0 248 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 CAMKVQ8NCB2 501 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 TMEM116Q8NCL8 245 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 RBM15BQ8NDT2 890 aaKnown RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 LPCAT1Q8NF37 534 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 SLC25A43Q8WUT9 341 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 ZNF480Q8WV37 535 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 ST8SIA2Q92186 375 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 RAPGEF5Q92565 580 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 DTNBP1Q96EV8 351 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 MAP7D2Q96T17 732 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 PLIN2Q99541 437 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 GAL3ST1Q99999 423 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 NUDT22Q9BRQ3 303 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 ERP44Q9BS26 406 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 THUMPD2Q9BTF0 503 aaKnown RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 NUP85Q9BW27 656 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 TEX13AQ9BXU3 409 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 MTMR12Q9C0I1 747 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 SLC25A32Q9H2D1 315 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 OSGEPL1Q9H4B0 414 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 SERHL2Q9H4I8 314 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 EHD1Q9H4M9 534 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 DENND2DQ9H6A0 471 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 BCO1Q9HAY6 547 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 PLEKHA2Q9HB19 425 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 MAGEE1Q9HCI5 957 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 SLAMF7Q9NQ25 335 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 XPNPEP3Q9NQH7 507 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 PRMT8Q9NR22 394 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 CENPMQ9NSP4 180 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 QPCTLQ9NXS2 382 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.79□□□□□ -1.89e-10■□□□□ 8.4
SF3B1-205ENST00000424674 STK26Q9P289 416 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 PSME2Q9UL46 239 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 AGAP1Q9UPQ3 857 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 DRG1Q9Y295 367 aaKnown RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 KCNK7Q9Y2U2 307 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 WDR19Q8NEZ3 1342 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ZNF335Q9H4Z2 1342 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 XKRY2A2RUG3 117 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 A6NL46 340 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ANXA2P2A6NMY6 339 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 BTBD18B2RXH4 712 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 CASC3O15234 703 aaKnown RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ADCY6O43306 1168 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 SMAD6O43541 496 aaKnown RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 DIAPH2O60879 1101 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 RAMP2O60895 175 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 IDH1O75874 414 aaKnown RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ALDH1A2O94788 518 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ONECUT2O95948 504 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 PENKP01210 267 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 AMY1AP04745 511 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 POLR2MP0CAP2 368 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ARP10275 920 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 CYP2C9P11712 490 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ETS1P14921 441 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 GABRB1P18505 474 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 GALP22466 123 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 MYF6P23409 242 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 GLRA2P23416 452 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 TNFRSF8P28908 595 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 CORO1AP31146 461 aaKnown RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 SREBF1P36956 1147 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 PRKCIP41743 596 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 PITPNBP48739 271 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 UCP3P55916 312 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 UFM1P61960 85 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 NOMO3P69849 1222 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ARHGAP8P85298 464 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 NIPAL4Q0D2K0 466 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 IL24Q13007 206 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 GALNT3Q14435 633 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 IL11RAQ14626 422 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 DPYSL2Q16555 572 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 FBXO48Q5FWF7 155 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 SPATA46Q5T0L3 261 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 GKAP1Q5VSY0 366 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 FAM171A1Q5VUB5 890 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 SFMBT2Q5VUG0 894 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 NAIF1Q69YI7 327 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 NEK5Q6P3R8 708 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ZCCHC12Q6PEW1 402 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 PSRC1Q6PGN9 363 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 PCSK4Q6UW60 755 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ISLR2Q6UXK2 745 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 LRIG3Q6UXM1 1119 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ABHD15Q6UXT9 468 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 SYNE3Q6ZMZ3 975 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 FAM83AQ86UY5 434 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms