RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 MYZAPP0CAP1 466 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 FCER1AP12319 257 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 CPA1P15085 419 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ATF6P18850 670 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 CCNA2P20248 432 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 CRABP2P29373 138 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 SLC26A3P40879 764 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ACAA2P42765 397 aaKnown RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 GPR3P46089 330 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 GDI2P50395 445 aaKnown RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 ANXA11P50995 505 aaKnown RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 PROK1P58294 105 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 NXPH1P58417 271 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 STARD6P59095 220 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 RPP30P78346 268 aaKnown RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 CDK18Q07002 472 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ACTN3Q08043 901 aaPredicted RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 ZNF844Q08AG5 666 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 SLC10A2Q12908 348 aaPredicted RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 DMC1Q14565 340 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 SLC39A14Q15043 492 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 SMAD1Q15797 465 aaKnown RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 SLC39A12Q504Y0 691 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 FSCBQ5H9T9 825 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 CEP85LQ5SZL2 805 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ZNF772Q68DY9 489 aaPredicted RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 CENPPQ6IPU0 288 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 FAM122CQ6P4D5 195 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ZNF783Q6ZMS7 281 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 RFPL4BQ6ZWI9 263 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 UBE3BQ7Z3V4 1068 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 KRT28Q7Z3Y7 464 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 FAM160B2Q86V87 743 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 CLVS1Q8IUQ0 354 aaPredicted RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 UNC45BQ8IWX7 931 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 CSGALNACT2Q8N6G5 542 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 AOPEPQ8N6M6 819 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 NATD1Q8N6N6 113 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ATAD1Q8NBU5 361 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 OR7G1Q8NGA0 311 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 OR9A1PQ8NGU1 263 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 OR10Z1Q8NGY1 313 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ZNF461Q8TAF7 563 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ZNF671Q8TAW3 534 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 TEX47Q8TBZ9 253 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 HCAR2Q8TDS4 363 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 COG1Q8WTW3 980 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 TGFBRAP1Q8WUH2 860 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 UCMAQ8WVF2 138 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 TRIM43Q96BQ3 446 aaPredicted RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 FBXL20Q96IG2 436 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 AIFM3Q96NN9 605 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 CALN1Q9BXU9 219 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 NFKBIZQ9BYH8 718 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 NUF2Q9BZD4 464 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 SHCBP1LQ9BZQ2 653 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 KRT23Q9C075 422 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 SEMA4CQ9C0C4 833 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 YIPF3Q9GZM5 350 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 NDEL1Q9GZM8 345 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 C1orf21Q9H246 121 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 KCNK13Q9HB14 408 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 SPACA1Q9HBV2 294 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ASB6Q9NWX5 421 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ARHGEF38Q9NXL2 777 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ZNF70Q9UC06 446 aaPredicted RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 CD300AQ9UGN4 299 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 SAP30BPQ9UHR5 308 aaKnown RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 VPS28Q9UK41 221 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 STX8Q9UNK0 236 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 DNM3Q9UQ16 869 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 RUVBL1Q9Y265 456 aaKnown RBP2.94□□□□□ -1.94
PMS1-209ENST00000424059 HEY1Q9Y5J3 304 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 USP16Q9Y5T5 823 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 SNX9Q9Y5X1 595 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 PIAS3Q9Y6X2 628 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ATP8B3O60423 1300 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 ERBINQ96RT1 1412 aa2.94□□□□□ -1.94
PMS1-209ENST00000424059 A0A087X0M5 115 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 FAM237AA0A1B0GTK4 181 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 A0A1B0GX30 115 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 TYW5A2RUC4 315 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 CAPN8A6NHC0 703 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 CGB1A6NKQ9 187 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 FOXO6A8MYZ6 492 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 F5H0A9 414 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 SPECC1L-ADORA2AF8WAN1 911 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 XPO1O14980 1071 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 PER2O15055 1255 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 TP73O15350 636 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 RRP8O43159 456 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 MGRN1O60291 552 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 SOAT2O75908 522 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 ATP5HO75947 161 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 TOMM70O94826 608 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 SLU7O95391 586 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 SGPL1O95470 568 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 IFNA14P01570 189 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 ANXA1P04083 346 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 AMY1AP04745 511 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms