RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 MAGED1Q9Y5V3 778 aaPredicted RBP16.73■□□□□ 0.27
PKP4-204ENST00000421462 USP3Q9Y6I4 520 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 BDNFP23560 247 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 DCKP27707 260 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 RCVRNP35243 200 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 MBTD1Q05BQ5 628 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 RPS6KA2Q15349 733 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 IMPG1Q17R60 797 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 HABP4Q5JVS0 413 aaKnown RBP16.73■□□□□ 0.27
PKP4-204ENST00000421462 SYPL2Q5VXT5 272 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 NIPAL1Q6NVV3 410 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 ISL2Q96A47 359 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 SETD4Q9NVD3 440 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 TBC1D13Q9NVG8 400 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 GPRC5DQ9NZD1 345 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 TMEM181Q9P2C4 612 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 FZD10Q9ULW2 581 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 USP22Q9UPT9 525 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 A0A0J9YYE9 177 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 XYLBO75191 536 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 ALDH4A1P30038 563 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 CD68P34810 354 aaPredicted RBP16.73■□□□□ 0.27
PKP4-204ENST00000421462 TPD52P55327 224 aaPredicted RBP16.73■□□□□ 0.27
PKP4-204ENST00000421462 BACE1P56817 501 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 PLIN5Q00G26 463 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 TRAP1Q12931 704 aaKnown RBP16.73■□□□□ 0.27
PKP4-204ENST00000421462 SLC36A3Q495N2 470 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 RBM20Q5T481 1227 aaKnown RBP16.73■□□□□ 0.27
PKP4-204ENST00000421462 NBPF12Q5TAG4 269 aaPredicted RBP16.73■□□□□ 0.27
PKP4-204ENST00000421462 ZNF470Q6ECI4 717 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 DCLRE1AQ6PJP8 1040 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 NANOGNBQ7Z5D8 188 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 PELI3Q8N2H9 469 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 SLC2A14Q8TDB8 520 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 CHPT1Q8WUD6 406 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 C3orf30Q96M34 536 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 FZD8Q9H461 694 aa16.73■□□□□ 0.27
PKP4-204ENST00000421462 MTF2Q9Y483 593 aaPredicted RBP16.73■□□□□ 0.27
PKP4-204ENST00000421462 GPC6Q9Y625 555 aaPredicted RBP16.73■□□□□ 0.27
PKP4-204ENST00000421462 ANGPT2O15123 496 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 OPRL1P41146 370 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 PTPN9P43378 593 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 BCAT1P54687 386 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 SEPT8Q92599 483 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 MUS81Q96NY9 551 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 C9orf16Q9BUW7 83 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 CCDC90BQ9GZT6 254 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 CCDC68Q9H2F9 335 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 SNX25Q9H3E2 840 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 CCM2LQ9NUG4 571 aaPredicted RBP16.72■□□□□ 0.27
PKP4-204ENST00000421462 CDH7Q9ULB5 785 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 ERGIC3Q9Y282 383 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 FAM155AB1AL88 458 aaPredicted RBP16.72■□□□□ 0.27
PKP4-204ENST00000421462 PPP6CO00743 305 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 SYNCRIPO60506 623 aaKnown RBP16.72■□□□□ 0.27
PKP4-204ENST00000421462 HUS1O60921 280 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 RSL1D1O76021 490 aaKnown RBP16.72■□□□□ 0.27
PKP4-204ENST00000421462 HSPA1AP0DMV8 641 aaKnown RBP16.72■□□□□ 0.27
PKP4-204ENST00000421462 HSPA1BP0DMV9 641 aaKnown RBP16.72■□□□□ 0.27
PKP4-204ENST00000421462 IL7RP16871 459 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 GLUD2P49448 558 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 RABL3Q5HYI8 236 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 SLC26A9Q7LBE3 791 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 LDB1Q86U70 411 aaPredicted RBP16.72■□□□□ 0.27
PKP4-204ENST00000421462 RDH11Q8TC12 318 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 PPP1R13LQ8WUF5 828 aa16.72■□□□□ 0.27
PKP4-204ENST00000421462 TUBA8Q9NY65 449 aaPredicted RBP16.72■□□□□ 0.27
PKP4-204ENST00000421462 EVLQ9UI08 416 aaPredicted RBP16.72■□□□□ 0.27
PKP4-204ENST00000421462 FAM32AQ9Y421 112 aaKnown RBP16.72■□□□□ 0.27
PKP4-204ENST00000421462 CLDN5O00501 218 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 DYNC1LI2O43237 492 aaPredicted RBP16.71■□□□□ 0.27
PKP4-204ENST00000421462 ESRRBO95718 433 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 INHBBP09529 407 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 ATICP31939 592 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 PPP1R8Q12972 351 aaKnown RBP16.71■□□□□ 0.27
PKP4-204ENST00000421462 FUNDC1Q8IVP5 155 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 NPWQ8N729 165 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 SLC7A14Q8TBB6 771 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 SNX19Q92543 992 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 C18orf25Q96B23 403 aaPredicted RBP16.71■□□□□ 0.27
PKP4-204ENST00000421462 SMPD3Q9NY59 655 aaPredicted RBP16.71■□□□□ 0.27
PKP4-204ENST00000421462 TNFSF13BQ9Y275 285 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 ANKRD6Q9Y2G4 727 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 CENPFP49454 3210 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 CCL22O00626 93 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 SULT1C4O75897 302 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 ARIH2O95376 493 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 ARF4P18085 180 aaPredicted RBP16.71■□□□□ 0.27
PKP4-204ENST00000421462 IDUAP35475 653 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 RPS9P46781 194 aaKnown RBP16.71■□□□□ 0.27
PKP4-204ENST00000421462 INCA1Q0VD86 236 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 TBPL2Q6SJ96 375 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 PIWIL4Q7Z3Z4 852 aaKnown RBP16.71■□□□□ 0.27
PKP4-204ENST00000421462 FAM83AQ86UY5 434 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 ERO1BQ86YB8 467 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 PCYOX1LQ8NBM8 494 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 RNF145Q96MT1 663 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 LHPPQ9H008 270 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 CASS4Q9NQ75 786 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 SPATA7Q9P0W8 599 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms